RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HYLS1Q96M11 299 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 HES4Q9HCC6 221 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 NECAP2Q9NVZ3 263 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 TREM2Q9NZC2 230 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 IGF2RP11717 2491 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 IGKV1D-8A0A087WSZ0 117 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 H0YL77 283 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 OR2A4O95047 310 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 ZBTB25P24278 435 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 DHODHQ02127 395 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 IKZF1Q13422 519 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF146Q15072 292 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 SPIN3Q5JUX0 258 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 SHEQ5VZ18 495 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 TMEM108Q6UXF1 575 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 TMED4Q7Z7H5 227 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 C11orf53Q8IXP5 236 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 OR2A7Q96R45 310 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 CDIPTO14735 213 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 GIPP09681 153 aaPredicted RBP15.14■□□□□ 0.01
RAB39A-201ENST00000320578 CD200P41217 278 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 AADACL3Q5VUY0 350 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 ZNF660Q6AZW8 331 aaPredicted RBP15.14■□□□□ 0.01
RAB39A-201ENST00000320578 Q6P435 159 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 OR2AK2Q8NG84 335 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 OR52B4Q8NGK2 314 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 TMEM171Q8WVE6 324 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 CAPSLQ8WWF8 208 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 FN3KRPQ9HA64 309 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 DLL4Q9NR61 685 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 MGAT4CQ9UBM8 478 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 SH3BGRL2Q9UJC5 107 aa15.14■□□□□ 0.01
RAB39A-201ENST00000320578 TRGV8A0A0C4DH27 118 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 FABP7O15540 132 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 KLF3P57682 345 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 DHRS2Q13268 280 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 PDCD1Q15116 288 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 FIP1L1Q6UN15 594 aaKnown RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 LYG2Q86SG7 212 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 ZGRF1Q86YA3 2104 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 C12orf45Q8N5I9 185 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 SUMF2Q8NBJ7 301 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 MARCH1Q8TCQ1 289 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 MAFIPQ8WZ33 124 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 ZNF488Q96MN9 340 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 IL36RNQ9UBH0 155 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 MAP1BP46821 2468 aaKnown RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 OR5H8P0DN80 308 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 MDH2P40926 338 aaKnown RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 NKX2-5P52952 324 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 SELENOVP59797 346 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 RAP2BP61225 183 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 FBXL19-AS1Q494R0 122 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 BRICD5Q6PL45 260 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 C22orf34Q6ZV56 151 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 NCCRP1Q6ZVX7 275 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 ZBTB8BQ8NAP8 495 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 KDF1Q8NAX2 398 aaPredicted RBP15.13■□□□□ 0.01
RAB39A-201ENST00000320578 Q9N2K0 584 aa15.13■□□□□ 0.01
RAB39A-201ENST00000320578 TLN1Q9Y490 2541 aaKnown RBP15.12■□□□□ 0.01
RAB39A-201ENST00000320578 SPENQ96T58 3664 aaKnown RBP15.12■□□□□ 0.01
RAB39A-201ENST00000320578 TRAV24A0A0B4J272 114 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 H7C1Q1 480 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 DEGS1O15121 323 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 GRPP07492 148 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 HLA-GP17693 338 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 CFHR2P36980 270 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 ASCL1P50553 236 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 MSMPQ1L6U9 139 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 TMEM128Q5BJH2 165 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 BATF2Q8N1L9 274 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 OR10Z1Q8NGY1 313 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 MITD1Q8WV92 249 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 DPCDQ9BVM2 203 aaPredicted RBP15.12■□□□□ 0.01
RAB39A-201ENST00000320578 C5orf66Q9H5L9 145 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 SEBOXQ9HB31 216 aaPredicted RBP15.12■□□□□ 0.01
RAB39A-201ENST00000320578 BSNQ9UPA5 3926 aa15.12■□□□□ 0.01
RAB39A-201ENST00000320578 PIEZO2Q9H5I5 2752 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 C9orf170A2RU37 121 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 ATP6V1G2-DDX39BF2Z307 99 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 F5H5P2 479 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 SDCBPO00560 298 aaPredicted RBP15.11■□□□□ 0.01
RAB39A-201ENST00000320578 SH2D1BO14796 132 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 SNAPC5O75971 98 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 NXPH2O95156 264 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 GSTT2P0CG29 244 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 LPCAT3Q6P1A2 487 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 ZNF880Q6PDB4 577 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 NLRC3Q7RTR2 1065 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 DYRK2Q92630 601 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 NGBQ9NPG2 151 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 RASL12Q9NYN1 266 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 PIPOXQ9P0Z9 390 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 GLS2Q9UI32 602 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 FZR1Q9UM11 496 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 BOD1L1Q8NFC6 3051 aa15.11■□□□□ 0.01
RAB39A-201ENST00000320578 A0A0B4J2A0 478 aa15.1■□□□□ 0.01
RAB39A-201ENST00000320578 KIR2DS1A0A191URI9 304 aa15.1■□□□□ 0.01
RAB39A-201ENST00000320578 OR5H14A6NHG9 310 aa15.1■□□□□ 0.01
RAB39A-201ENST00000320578 DUS4LO95620 317 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms