RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 EIF5AP63241 154 aaKnown RBP13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 LINC00696Q6ZRV3 163 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 M1APQ8TC57 530 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 CNTNAP3Q9BZ76 1288 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 PLA2G3Q9NZ20 509 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF581Q9P0T4 197 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 K7EPK0 472 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 SPRY1O43609 319 aaPredicted RBP13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 ONECUT2O95948 504 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 BLVRBP30043 206 aaPredicted RBP13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST3H3Q16695 136 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 DOK3Q7L591 496 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 C20orf196Q8IYI0 205 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 FAM71E2Q8N5Q1 922 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 S100PBPQ96BU1 408 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 THOC3Q96J01 351 aaKnown RBP13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 RARRES2Q99969 163 aa13.52□□□□□ -0.25
SHROOM1-201ENST00000319854 S100A2P29034 98 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 MPLP40238 635 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 OR14K1Q8NGZ2 314 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 WFDC1Q9HC57 220 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 PARPBPQ9NWS1 579 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 KNG1P01042 644 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 SOD3P08294 240 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 CELA3AP09093 270 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 CXCL1P09341 107 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 TMEM225BP0DP42 221 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H1BP16401 226 aaKnown RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 MAS1LP35410 378 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 RBP2P50120 134 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 RAC1P63000 192 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 KDF1Q8NAX2 398 aaPredicted RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 ADPRHL1Q8NDY3 354 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 OR10D3Q8NH80 312 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 NTNG2Q96CW9 530 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 HDHD3Q9BSH5 251 aaPredicted RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 SH3BGRL3Q9H299 93 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 RFNGQ9Y644 331 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 FAM166BA8MTA8 275 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 TMEM14DPA8MWL7 114 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 HOXA6P31267 233 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 ZNF84P51523 738 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 UCP2P55851 309 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 GRB2P62993 217 aaKnown RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 FAM3AP98173 230 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 RHEBQ15382 184 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 C6orf15Q6UXA7 325 aaPredicted RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 KCNG3Q8TAE7 436 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 NABP1Q96AH0 204 aa13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 LSM5Q9Y4Y9 91 aaKnown RBP13.51□□□□□ -0.25
SHROOM1-201ENST00000319854 FAM221AA4D161 298 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 JTBO76095 146 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 AMY2BP19961 511 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 LSM6P62312 80 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 AAED1Q7RTV5 226 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 C6orf201Q7Z4U5 140 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 C1orf147Q96MC9 270 aaPredicted RBP13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 FOXJ2Q9P0K8 574 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 URGCP-MRPS24S4R325 110 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 LNP1A1A4G5 178 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 DANCRP0C864 163 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 CCL2P13500 99 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 PPP1CCP36873 323 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 RPUSD3Q6P087 351 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 SLC23A3Q6PIS1 610 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 PEG10Q86TG7 708 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 FGFBP3Q8TAT2 258 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 MOB1AQ9H8S9 216 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 KCNJ16Q9NPI9 418 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 GFOD1Q9NXC2 390 aa13.5□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A087WZY1 265 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A096LPE4 126 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 A0A1W2PPZ6 126 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 CEACAM18A8MTB9 384 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 SLC31A2O15432 143 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 CYB561P49447 251 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 SNU13P55769 128 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 TRA2AQ13595 282 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 DYRK2Q92630 601 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 SLC35B3Q9H1N7 401 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 RCL1Q9Y2P8 373 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 PET100P0DJ07 73 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 ZNF32P17041 273 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 TBPP20226 339 aa13.49□□□□□ -0.25
SHROOM1-201ENST00000319854 PTGER4P35408 488 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms