RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 CHD3Q12873 2000 aaKnown RBP12.4□□□□□ -0.42
PABPC1-201ENST00000318607 SPTY2D1-AS1A0A0U1RR47 76 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 RABIFP47224 123 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 CAPZBP47756 277 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 DYNLT3P51808 116 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 LBX1P52954 281 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 RNF4P78317 190 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 HSD11B2P80365 405 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 ZNF665Q9H7R5 613 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 ANXA10Q9UJ72 324 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 OSGIN2Q9Y236 505 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 USF3Q68DE3 2245 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 DMDP11532 3685 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 SHISA7A6NL88 538 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 SNAI3Q3KNW1 292 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 C10orf91Q5T1B1 145 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 OR14L1PQ8NHC6 308 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 CABLES2Q9BTV7 478 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 EP300Q09472 2414 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 EFNA2O43921 213 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 DANCRP0C864 163 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 FAM189A2Q15884 450 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 GPBAR1Q8TDU6 330 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 FAM210BQ96KR6 192 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 TP53RKQ96S44 253 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 MYOZ1Q9NP98 299 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 LAMP3Q9UQV4 416 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF729A6NN14 1252 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 CELA2AP08217 269 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF17P17021 662 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 SHDQ96IW2 340 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 PLK3Q9H4B4 646 aa12.39□□□□□ -0.43
PABPC1-201ENST00000318607 AKIRIN1Q9H9L7 192 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF816-ZNF321PA0A0X1KG74 233 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 NUDT19A8MXV4 375 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 AADACP22760 399 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 RTP5Q14D33 572 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 OR8G2PQ6IF36 304 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 MSL2Q9HCI7 577 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 CD55P08174 381 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 RPS2P15880 293 aaKnown RBP12.38□□□□□ -0.43
PABPC1-201ENST00000318607 HTR5AP47898 357 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 RELQ04864 619 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-201ENST00000318607 VAX1Q5SQQ9 334 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 MRPL41Q8IXM3 137 aaKnown RBP12.38□□□□□ -0.43
PABPC1-201ENST00000318607 M0R135 149 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 HSPA12AO43301 675 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 IGHV4-34P06331 123 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 B4GALT1P15291 398 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 DDTP30046 118 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-201ENST00000318607 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 C1orf53Q5VUE5 145 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-201ENST00000318607 HLA-CQ95604 372 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
PABPC1-201ENST00000318607 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 NPIPA2E9PIF3 369 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 NPIPA3F8WFD2 350 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 HS3ST1O14792 307 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 SCGB1D1O95968 90 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 ISG15P05161 165 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-201ENST00000318607 EGR1P18146 543 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 FUT3P21217 361 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 PMP22Q01453 160 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 SPINK9Q5DT21 86 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 DMBX1Q8NFW5 382 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 CADP27708 2225 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 IGSF23A1L1A6 192 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 OR5H1A6NKK0 313 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 CHST1O43916 411 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 IGHV2-5P01817 119 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 TBPP20226 339 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 BLKP51451 505 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 TMPRSS7Q7RTY8 843 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 OR1N1Q8NGS0 311 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 POC1BQ8TC44 478 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 NAA60Q9H7X0 242 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 SEBOXQ9HB31 216 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-201ENST00000318607 PISDQ9UG56 409 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 STARD10Q9Y365 291 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
PABPC1-201ENST00000318607 NBASA2RRP1 2371 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms