RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 INPP1P49441 399 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 TMEM33P57088 247 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 ERVK11-1P61568 191 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
HMGA1-201ENST00000311487 C2orf76Q3KRA6 126 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 C1orf100Q5SVJ3 147 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 PEG10Q86TG7 708 aaKnown RBP15.2■□□□□ 0.02
HMGA1-201ENST00000311487 CMTM4Q8IZR5 234 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 C1orf87Q8N0U7 546 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 FAM58AQ8N1B3 248 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 FGFRL1Q8N441 504 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 FOXRED1Q96CU9 486 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-201ENST00000311487 CPNE2Q96FN4 548 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-201ENST00000311487 CCL13Q99616 98 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 THAP7Q9BT49 309 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-201ENST00000311487 STEAP1Q9UHE8 339 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 KDM4BO94953 1096 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 CSTBP04080 98 aaKnown RBP15.19■□□□□ 0.02
HMGA1-201ENST00000311487 VSIG8P0DPA2 414 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 MICBQ29980 383 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 ZNF57Q68EA5 555 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-201ENST00000311487 FAM166AQ6J272 317 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 BRICD5Q6PL45 260 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 BAIAP2L2Q6UXY1 529 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 LRRC75A-AS1Q8N1F1 130 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 OR6M1Q8NGM8 313 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 ENKURQ8TC29 256 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 FAM3DQ96BQ1 224 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 TMEM246Q9BRR3 403 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 MRI1Q9BV20 369 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 NLKQ9UBE8 527 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 OR5V1Q9UGF6 321 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 ZANQ9Y493 2812 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 OR2AT4A6NND4 320 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 RNF223E7ERA6 249 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 HSPB6O14558 160 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 MPIG6BO95866 241 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 IGHV2-70P01814 119 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 IL2RGP31785 369 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 EFNB2P52799 333 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 UNC119Q13432 240 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 MZT2BQ6NZ67 158 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 RAB1CQ92928 201 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 TIMD4Q96H15 378 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 SELENOIQ9C0D9 397 aa15.19■□□□□ 0.02
HMGA1-201ENST00000311487 IGKV1D-17A0A075B6S4 117 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 IGHV4-61A0A0C4DH41 118 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 PSG2P11465 335 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 AMY2BP19961 511 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 CFHR2P36980 270 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 SEC61A1P61619 476 aaKnown RBP15.18■□□□□ 0.02
HMGA1-201ENST00000311487 PITPNAQ00169 270 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 IKZF1Q13422 519 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 DNM1P46Q6ZS02 220 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 RTN4RL2Q86UN3 420 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 CD177Q8N6Q3 437 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 ZSCAN4Q8NAM6 433 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-201ENST00000311487 PXT1Q8NFP0 134 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 OR10Z1Q8NGY1 313 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 NICN1Q9BSH3 213 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 HES4Q9HCC6 221 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 ING3Q9NXR8 418 aa15.18■□□□□ 0.02
HMGA1-201ENST00000311487 GEMIN2O14893 280 aaKnown RBP15.17■□□□□ 0.02
HMGA1-201ENST00000311487 TMPRSS2O15393 492 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 CD37P11049 281 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 TAF9Q16594 264 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 ASCL4Q6XD76 172 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 AKAP14Q86UN6 197 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 GLCCI1Q86VQ1 547 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 CDH26Q8IXH8 852 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 IZUMO1Q8IYV9 350 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 CIARTQ8N365 385 aaPredicted RBP15.17■□□□□ 0.02
HMGA1-201ENST00000311487 FAM216BQ8N7L0 139 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 ZNRF1Q8ND25 227 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 DUSP18Q8NEJ0 188 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 ST3GAL6Q9Y274 331 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 MRPS7Q9Y2R9 242 aaKnown RBP15.17■□□□□ 0.02
HMGA1-201ENST00000311487 TMEM272A0A1B0GTI8 110 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 MEX3AA1L020 520 aaKnown RBP15.17■□□□□ 0.02
HMGA1-201ENST00000311487 LGALS8O00214 317 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 NOS1APO75052 506 aaPredicted RBP15.17■□□□□ 0.02
HMGA1-201ENST00000311487 MGMTP16455 207 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 GABRR1P24046 479 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 GIFP27352 417 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 CFPP27918 469 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 DGCR2P98153 550 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 SMIM21Q3B7S5 101 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 SAXO1Q8IYX7 474 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 OSR2Q8N2R0 312 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 FOXC2Q99958 501 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 ABCG5Q9H222 651 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 ETV7Q9Y603 341 aa15.17■□□□□ 0.02
HMGA1-201ENST00000311487 MEIOCA2RUB1 952 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 SIRPB1O00241 398 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 CTDSPLO15194 276 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 MDH2P40926 338 aaKnown RBP15.16■□□□□ 0.02
HMGA1-201ENST00000311487 QRFPP83859 136 aa15.16■□□□□ 0.02
HMGA1-201ENST00000311487 GPR176Q14439 515 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms