RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SPINK14Q6IE38 97 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 RHBDD2Q6NTF9 364 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 FBXL14Q8N1E6 418 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 SPACA9Q96E40 222 aaPredicted RBP11.09□□□□□ -0.63
RETREG3-201ENST00000309428 NMES1Q9C002 83 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 C12orf49Q9H741 205 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 NDUFA2O43678 99 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 TK1P04183 234 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 CD79AP11912 226 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
RETREG3-201ENST00000309428 UNC119Q13432 240 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 GAMTQ14353 236 aa11.09□□□□□ -0.63
RETREG3-201ENST00000309428 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
RETREG3-201ENST00000309428 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 A0A0G2JMM0 328 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 A0A1W2PPB8 328 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 A0A1W2PRS3 328 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 LIPT2A6NK58 231 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 KIR3DP1A8MWS1 328 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 EIF1BO60739 113 aaKnown RBP11.08□□□□□ -0.63
RETREG3-201ENST00000309428 EIF1P41567 113 aaKnown RBP11.08□□□□□ -0.63
RETREG3-201ENST00000309428 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.63
RETREG3-201ENST00000309428 NSUN5P2Q63ZY6 315 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 ASPHD2Q6ICH7 369 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 ZNF709Q8N972 641 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 RPS4Y2Q8TD47 263 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 ASB13Q8WXK3 278 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.63
RETREG3-201ENST00000309428 CCDC187A0A096LP49 1063 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 TGIF2-C20orf24A0A0A6YYL0 155 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 P04436 131 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ACKR3P25106 362 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ZXDAP98168 799 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ZNF774Q6NX45 483 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ZNF66Q6ZN08 573 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 SPIN2AQ99865 258 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 SPIN2BQ9BPZ2 258 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 LPAR5Q9H1C0 372 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 SLC26A1Q9H2B4 701 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 MSL2Q9HCI7 577 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 NECAP2Q9NVZ3 263 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ZNF581Q9P0T4 197 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 EPHA8P29322 1005 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-201ENST00000309428 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
RETREG3-201ENST00000309428 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 TMEM267Q0VDI3 215 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-201ENST00000309428 SPANXN5Q5MJ07 72 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 MYPOPQ86VE0 399 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ARHGEF39Q8N4T4 335 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 COMMD1Q8N668 190 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 RDH5Q92781 318 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 SPTSSAQ969W0 71 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 FAM131CQ96AQ9 280 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 RAB39BQ96DA2 213 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 MVB12AQ96EY5 273 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 HES7Q9BYE0 225 aa11.08□□□□□ -0.64
RETREG3-201ENST00000309428 PQLC2LA1A4F0 135 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
RETREG3-201ENST00000309428 HEXAP06865 529 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 CALCRP30988 508 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 LTC4SQ16873 150 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 WDR25Q64LD2 544 aaPredicted RBP11.07□□□□□ -0.64
RETREG3-201ENST00000309428 SLC25A31Q9H0C2 315 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 GPR132Q9UNW8 380 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 DCHS1Q96JQ0 3298 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 BLACEA4D250 179 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ANKUB1A6NFN9 424 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 HS3ST1O14792 307 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 SERPINA7P05543 415 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 TLE4Q04727 773 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ZNF519Q8TB69 540 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 TRAV39A0A0B4J263 110 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 COLCA2A8K830 154 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 PPP5D1E7EU14 171 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 M0R135 149 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 HKR1P10072 659 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 DOK3Q7L591 496 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ZNF799Q96GE5 643 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
RETREG3-201ENST00000309428 CDX2Q99626 313 aaPredicted RBP11.07□□□□□ -0.64
RETREG3-201ENST00000309428 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ABHD14AQ9BUJ0 271 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 OPA3Q9H6K4 179 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 ST3GAL6Q9Y274 331 aa11.07□□□□□ -0.64
RETREG3-201ENST00000309428 LHFPL6Q9Y693 200 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms