RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 YTHDF2Q9Y5A9 579 aaKnown RBP11.21□□□□□ -0.61
USP38-201ENST00000307017 RBFOX3A6NFN3 312 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 SNRPGP15A8MWD9 76 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 TMEM189-UBE2V1I3L0A0 370 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 M0QZ24 198 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 DOK1Q99704 481 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 NDUFB3O43676 98 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 SFT2D2O95562 160 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 NAT2P11245 290 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 BTF3P20290 206 aaKnown RBP11.21□□□□□ -0.61
USP38-201ENST00000307017 LRRC29Q8WV35 223 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 H3BTX0 84 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 DSCR3O14972 297 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 FUT6P51993 359 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.62
USP38-201ENST00000307017 FZD2Q14332 565 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 OR4D11Q8NGI4 311 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 SLC35B3Q9H1N7 401 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 LRRC10Q5BKY1 277 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 CBLN3Q6UW01 205 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 PAGE4O60829 102 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.62
USP38-201ENST00000307017 CEACAM5P06731 702 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 CTXN2P0C2S0 81 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 RFLNBQ8N5W9 214 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 ADAT3Q96EY9 351 aaPredicted RBP11.21□□□□□ -0.62
USP38-201ENST00000307017 GPR61Q9BZJ8 451 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.62
USP38-201ENST00000307017 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
USP38-201ENST00000307017 RPEQ96AT9 228 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 RPLP1P05386 114 aaKnown RBP11.2□□□□□ -0.62
USP38-201ENST00000307017 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
USP38-201ENST00000307017 IGHV3-72A0A0B4J1Y9 119 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 NDUFB6O95139 128 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 FPR2P25090 351 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 THBS4P35443 961 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 WNT3P56703 355 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 TGIF1Q15583 401 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 TWIST1Q15672 202 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 LAMB1P07942 1786 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 SKP2Q13309 424 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 EMC4Q5J8M3 183 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 CMTM3Q96MX0 182 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 TMED3Q9Y3Q3 217 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 C11orf94C9JXX5 98 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 ZNF253O75346 499 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 OR8B12Q8NGG6 310 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 SLC25A19Q9HC21 320 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 IL36GQ9NZH8 169 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
USP38-201ENST00000307017 CRISP2P16562 243 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 EFNB2P52799 333 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 LGALSLQ3ZCW2 172 aaPredicted RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 CALHM3Q86XJ0 350 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 OR8G5Q8NG78 346 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 SMIM21Q3B7S5 101 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 LYZL2Q7Z4W2 148 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 ASCL3Q9NQ33 180 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 FRG2CA6NGY1 282 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 DHHO43323 396 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 SRSF10O75494 262 aaKnown RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 KLK2P20151 261 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 WDR61Q9GZS3 305 aaKnown RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 B4DEV8 164 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 MFNGO00587 321 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 EPPINO95925 133 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 IGHEP01854 428 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 IL11P20809 199 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 UBE2L3P68036 154 aaKnown RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 MRPL24Q96A35 216 aaKnown RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 PPICP45877 212 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 Q5PR19 223 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 MRGPRFQ96AM1 343 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 CTSVO60911 334 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 LIMS3P0CW19 117 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 LIMS4P0CW20 117 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 MAP1LC3CQ9BXW4 147 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 FGF20Q9NP95 211 aaPredicted RBP11.19□□□□□ -0.62
USP38-201ENST00000307017 LPAR3Q9UBY5 353 aa11.19□□□□□ -0.62
USP38-201ENST00000307017 ECSCRQ19T08 205 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 LDLRAD3Q86YD5 345 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 GAPTQ8N292 157 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms