RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR2H2O95918 312 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GTF2F2P13984 249 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 EPHA1P21709 976 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RANBP1P43487 201 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ARF6P62330 175 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 RPL31P62899 125 aaKnown RBP9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SCN1BQ07699 218 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 EDDM3AQ14507 147 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GPR157Q5UAW9 335 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ELP2Q6IA86 826 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 GLIPR1L1Q6UWM5 242 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TMEM91Q6ZNR0 172 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OSR2Q8N2R0 312 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 KIR3DL3Q8N743 410 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CHST4Q8NCG5 386 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 DACT3Q96B18 629 aaPredicted RBP9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 POM121Q96HA1 1249 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 CHST6Q9GZX3 395 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 OPN4Q9UHM6 478 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 SF3B6Q9Y3B4 125 aaKnown RBP9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 KPTNQ9Y664 436 aa9.09□□□□□ -0.95
CSPG4P1Y-201ENST00000306641 ZANQ9Y493 2812 aa9.09□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 hCG_1809904A0A1W2PP81 198 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 A0A1W2PPE2 198 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 A0A1W2PR64 198 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 A0A1W2PRV1 198 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PDCD5O14737 125 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MGST3O14880 152 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 DEGS1O15121 323 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CRTAPO75718 401 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 AVPP01185 164 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 UBBP0CG47 229 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GALP22466 123 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 RBM11P57052 281 aaKnown RBP9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PDCD1Q15116 288 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PIGYQ3MUY2 71 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ASCL4Q6XD76 172 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LRRTM1Q86UE6 522 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 BPIFB2Q8N4F0 458 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR4M1Q8NGD0 313 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR51T1Q8NGJ9 327 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 UPRTQ96BW1 309 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 WDFY2Q96P53 400 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CST11Q9H112 138 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PPA2Q9H2U2 334 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF696Q9H7X3 374 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PLGRKTQ9HBL7 147 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C19orf12Q9NSK7 152 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NUP50Q9UKX7 468 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 STUB1Q9UNE7 303 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SSR3Q9UNL2 185 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ST3GAL6Q9Y274 331 aa9.08□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 KIAA2026Q5HYC2 2103 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TRDV1A0A1B0GX56 115 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 M0R1W7 72 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SLC33A1O00400 549 aaPredicted RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 HSPB6O14558 160 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ZNF737O75373 536 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR7C1O76099 320 aaPredicted RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 FPR2P25090 351 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 HTR2CP28335 458 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PSMD7P51665 324 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MPV17LQ2QL34 196 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PAN3Q58A45 887 aaKnown RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NHLRC3Q5JS37 347 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 SYT6Q5T7P8 510 aaPredicted RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C22orf42Q6IC83 251 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 C17orf107Q6ZR85 190 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 VMO1Q7Z5L0 202 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TRAPPC6BQ86SZ2 158 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR4D6Q8NGJ1 314 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR6M1Q8NGM8 313 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MRPS24Q96EL2 167 aaKnown RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MS4A7Q9GZW8 240 aaPredicted RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OCEL1Q9H607 264 aa9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 AK6Q9Y3D8 172 aaKnown RBP9.07□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NSD1Q96L73 2696 aaPredicted RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 A0A1W2PP11 408 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 hADV38S2A0JD32 116 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TMEM82A0PJX8 343 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 PSPNO60542 156 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 CSN2P05814 226 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MMP9P14780 707 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MGMTP16455 207 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 LMO1P25800 156 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 OR3A1P47881 315 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GP2P55259 537 aaKnown RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 MEF2CQ06413 473 aaPredicted RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ATXN7L3Q14CW9 347 aaPredicted RBP9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 TIMM50Q3ZCQ8 353 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 ATAD3CQ5T2N8 411 aa9.06□□□□□ -0.96
CSPG4P1Y-201ENST00000306641 NCR3LG1Q68D85 454 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms