RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 COX19Q49B96 90 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 OR5H1A6NKK0 313 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 GAPDHP04406 335 aaKnown RBP11.35□□□□□ -0.59
COL3A1-201ENST00000304636 CCL11P51671 97 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 FOXO1Q12778 655 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 CARFQ8N187 725 aa11.35□□□□□ -0.59
COL3A1-201ENST00000304636 TRDCB7Z8K6 153 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 OR10J1P30954 320 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 ACAA2P42765 397 aaKnown RBP11.34□□□□□ -0.59
COL3A1-201ENST00000304636 LGALS4P56470 323 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 PAX5Q02548 391 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 SPATA46Q5T0L3 261 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 DPF1Q92782 380 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 SDHCQ99643 169 aaPredicted RBP11.34□□□□□ -0.59
COL3A1-201ENST00000304636 FKBP11Q9NYL4 201 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 PABPC1L2AQ5JQF8 200 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 FAM60AQ9NP50 221 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 TIMM9Q9Y5J7 89 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 TRBV5-5A0A0J9YX44 114 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 LIPT2A6NK58 231 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 SOX15O60248 233 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 PPYP01298 95 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 FSTP19883 344 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 KIR3DL2P43630 455 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 DEFB108BQ8NET1 73 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 ACY3Q96HD9 319 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 MEGF10Q96KG7 1140 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 PROCRQ9UNN8 238 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 MRPS18BQ9Y676 258 aaKnown RBP11.34□□□□□ -0.59
COL3A1-201ENST00000304636 GYPAP02724 150 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 RFLNBQ8N5W9 214 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 CLEC3BP05452 202 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 FZD5Q13467 585 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 VAX1Q5SQQ9 334 aa11.34□□□□□ -0.59
COL3A1-201ENST00000304636 MPTX1A8MV57 137 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 ZPLD1Q8TCW7 415 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 KLHDC2Q9Y2U9 406 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 RCC1P18754 421 aaPredicted RBP11.33□□□□□ -0.6
COL3A1-201ENST00000304636 AMTP48728 403 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 TMEM211Q6ICI0 200 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 GNRHR2Q96P88 292 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 LRFN3Q9BTN0 628 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 SLC26A1Q9H2B4 701 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 ZNF576Q9H609 170 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 GPR27Q9NS67 375 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 MARF1Q9Y4F3 1742 aaKnown RBP11.33□□□□□ -0.6
COL3A1-201ENST00000304636 SPINK4O60575 86 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 FCGR3BO75015 233 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 FGF2P09038 288 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 RPS4XP62701 263 aaKnown RBP11.33□□□□□ -0.6
COL3A1-201ENST00000304636 Q6ZN92 141 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 WDR61Q9GZS3 305 aaKnown RBP11.33□□□□□ -0.6
COL3A1-201ENST00000304636 COL4A1P02462 1669 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 GEMIN2O14893 280 aaKnown RBP11.33□□□□□ -0.6
COL3A1-201ENST00000304636 KIR2DS2P43631 304 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 SARAFQ96BY9 339 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 OR2D2Q9H210 308 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 FUT9Q9Y231 359 aa11.33□□□□□ -0.6
COL3A1-201ENST00000304636 CENPVL1A0A0U1RR11 272 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 PITX3O75364 302 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 RPLP1P05386 114 aaKnown RBP11.32□□□□□ -0.6
COL3A1-201ENST00000304636 WIPI1Q5MNZ9 446 aaPredicted RBP11.32□□□□□ -0.6
COL3A1-201ENST00000304636 STUMQ69YW2 141 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 GAPTQ8N292 157 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 KIAA1456Q9P272 454 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 HEXAP06865 529 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 KIAA1217Q5T5P2 1943 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 URB1O60287 2271 aaKnown RBP11.32□□□□□ -0.6
COL3A1-201ENST00000304636 NKX2-6A6NCS4 301 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 YIF1AO95070 293 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 CA6P23280 308 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 PPP1CAP62136 330 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 OR5I1Q13606 314 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 FAM209BQ5JX69 171 aa11.32□□□□□ -0.6
COL3A1-201ENST00000304636 PTCRAQ6ISU1 281 aaPredicted RBP11.32□□□□□ -0.6
COL3A1-201ENST00000304636 ADAT3Q96EY9 351 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms