RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■□□□ 11.9
CTTN-201ENST00000301843 PLCXD3Q63HM9 321 aa11.72□□□□□ -0.53
CTTN-201ENST00000301843 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
CTTN-201ENST00000301843 TCEAL3Q969E4 200 aa11.72□□□□□ -0.53
CTTN-201ENST00000301843 SPTSSAQ969W0 71 aa11.72□□□□□ -0.53
CTTN-201ENST00000301843 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
CTTN-201ENST00000301843 RNF122Q9H9V4 155 aa11.72□□□□□ -0.53
CTTN-201ENST00000301843 IGHV5-10-1A0A0J9YXX1 117 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 OR2C1O95371 312 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 MDKP21741 143 aaPredicted RBP11.71□□□□□ -0.53
CTTN-201ENST00000301843 P2RY1P47900 373 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 RGS19P49795 217 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 RBP2P50120 134 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 HERV-K104P61576 105 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 RPS23P62266 143 aaKnown RBP11.71□□□□□ -0.53
CTTN-201ENST00000301843 SLC25A53Q5H9E4 307 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 SOHLH1Q5JUK2 328 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 RABEPKQ7Z6M1 372 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 ZNF561Q8N587 486 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 EDARADDQ8WWZ3 215 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 OR51B6Q9H340 312 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 HDGFL3Q9Y3E1 203 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 IGHV3-64DA0A0J9YX35 117 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 A0A0U1RQV5 110 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 HSD17B6O14756 317 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 NRASP01111 189 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 IGLV3-1P01715 115 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 AGAP20933 346 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
CTTN-201ENST00000301843 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.53
CTTN-201ENST00000301843 PTRH2Q9Y3E5 179 aaKnown RBP11.71□□□□□ -0.53
CTTN-201ENST00000301843 TRAV39A0A0B4J263 110 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 UBE2CO00762 179 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 GPR137BO60478 399 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 ZIC3O60481 467 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 NDUFA6P56556 154 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 LSM6P62312 80 aaKnown RBP11.71□□□□□ -0.54
CTTN-201ENST00000301843 TSC22D1Q15714 1073 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 MAML2Q8IZL2 1156 aaPredicted RBP11.71□□□□□ -0.54
CTTN-201ENST00000301843 TMEM123Q8N131 208 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 SUMF2Q8NBJ7 301 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 RNF138Q8WVD3 245 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 PLEKHA2Q9HB19 425 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 BOD1L1Q8NFC6 3051 aa11.71□□□□□ -0.54
CTTN-201ENST00000301843 CFAP47Q6ZTR5 3102 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 H3F3AP84243 136 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 KCNMB1Q16558 191 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 NEK7Q8TDX7 302 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 SLC7A10Q9NS82 523 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 GPR179Q6PRD1 2367 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 ETV2O00321 342 aaPredicted RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 ADAM20O43506 726 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 TRAPPC6AO75865 159 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 LY86O95711 162 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 SCTP09683 121 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 ZNF133P52736 654 aaPredicted RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 RPS18P62269 152 aaKnown RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 FAM189A2Q15884 450 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 OR5C1Q8NGR4 320 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 UBE2ZQ9H832 354 aaPredicted RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 PISDQ9UG56 409 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 PRR14LQ5THK1 2151 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 A0A096LPE4 126 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 A0A1W2PPZ6 126 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 TOX3O15405 576 aaPredicted RBP11.7□□□□□ -0.54
CTTN-201ENST00000301843 TMEM50AO95807 157 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 ZNF154Q13106 437 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 C4orf17Q53FE4 359 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 GFI1BQ5VTD9 330 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
CTTN-201ENST00000301843 H7C1Q1 480 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 CXCL13O43927 109 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 SEC11BP0C7V7 166 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 CCL4P13236 92 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 ALDH3B1P43353 468 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 STARD6P59095 220 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 KIAA0141Q14154 515 aaPredicted RBP11.69□□□□□ -0.54
CTTN-201ENST00000301843 GNMTQ14749 295 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 FADS6Q8N9I5 356 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 C18orf12Q96KH6 178 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 GINS3Q9BRX5 216 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 EGLN1Q9GZT9 426 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 PROK2Q9HC23 129 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 FAM86C1Q9NVL1 165 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 IGKV1D-13A0A0B4J2D9 117 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
CTTN-201ENST00000301843 PPYP01298 95 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 CXCL1P09341 107 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 RFPL3SP0C7P2 107 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 IGKV1-13P0DP09 117 aa11.69□□□□□ -0.54
CTTN-201ENST00000301843 PSG4Q00888 419 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms