RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CEACAM6P40199 344 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 ZNF92Q03936 586 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 SLC16A14Q7RTX9 510 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 LRRC75AQ8NAA5 344 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 OR2L8Q8NGY9 312 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 C8orf44Q96CB5 159 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 FAM60AQ9NP50 221 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 THAP10Q9P2Z0 257 aaPredicted RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 TBC1D29Q9UFV1 150 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 NKX2-6A6NCS4 301 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 CEBPBP17676 345 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 GALR1P47211 349 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 TLE4Q04727 773 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 SAPCD1Q5SSQ6 148 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 OR5D14Q8NGL3 314 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 C16orf52Q8NHV5 167 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 FAM3CQ92520 227 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 EMG1Q92979 244 aaKnown RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 GCGP01275 180 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 TTRP02766 147 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 PRNPP04156 253 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 VIPR2P41587 438 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 ZNF41P51814 821 aaPredicted RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 ZNF573Q86YE8 665 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 LFNGQ8NES3 379 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 GLRX2Q9NS18 164 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 CHD9Q3L8U1 2897 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 A0A1B0GU03 582 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 SHISA8B8ZZ34 492 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 H0Y8X5 98 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 NUDT21O43809 227 aaKnown RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 CSNK1A1P48729 337 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 HINT1P49773 126 aaPredicted RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 RAB35Q15286 201 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 C1orf100Q5SVJ3 147 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 ERN2Q76MJ5 926 aaKnown RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 RERGQ96A58 199 aaPredicted RBP12.59□□□□□ -0.39
CDT1-201ENST00000301019 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 KIAA1456Q9P272 454 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 V9GYS6 101 aa12.59□□□□□ -0.39
CDT1-201ENST00000301019 SDK2Q58EX2 2172 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 H7BYZ3 331 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 CHRM2P08172 466 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 GCH1P30793 250 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 SEC13P55735 322 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 FOXL2P58012 376 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 OR13D1Q8NGV5 346 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 TSACCQ96A04 125 aaPredicted RBP12.58□□□□□ -0.39
CDT1-201ENST00000301019 CIB3Q96Q77 187 aaPredicted RBP12.58□□□□□ -0.39
CDT1-201ENST00000301019 IMMP2LQ96T52 175 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 ATP5SQ99766 215 aa12.58□□□□□ -0.39
CDT1-201ENST00000301019 A0A1W2PP55 124 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
CDT1-201ENST00000301019 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 NKX2-2O95096 273 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 STPG4Q8N801 248 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 GATAD1Q8WUU5 269 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 ZC2HC1AQ96GY0 325 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 OR10A2Q9H208 303 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 LRRC3CA6NJW4 275 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 QRFPP83859 136 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 ZNF542PQ5EBM4 170 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 Q5PR19 223 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 FBXL14Q8N1E6 418 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 RBM24Q9BX46 236 aaKnown RBP12.58□□□□□ -0.4
CDT1-201ENST00000301019 PBOV1Q9GZY1 135 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 NXF5Q9H1B4 397 aaKnown RBP12.58□□□□□ -0.4
CDT1-201ENST00000301019 GPR84Q9NQS5 396 aa12.58□□□□□ -0.4
CDT1-201ENST00000301019 A0A087WWC5 75 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 PGPEP1LA6NFU8 196 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 FIGNL2A6NMB9 653 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 ZNF787Q6DD87 383 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 RABEPKQ7Z6M1 372 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 ATG4DQ86TL0 474 aaPredicted RBP12.57□□□□□ -0.4
CDT1-201ENST00000301019 BTF3L4Q96K17 158 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 RBKSQ9H477 322 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 ZNF319Q9P2F9 582 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 TCRBV21S2A2A0A5A6 115 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 CEP290O15078 2479 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 CT45A8P0DMV1 189 aa12.57□□□□□ -0.4
CDT1-201ENST00000301019 CT45A9P0DMV2 189 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms