RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 PLEKHF2Q9H8W4 249 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 GPR173Q9NS66 373 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 IGHV3-20A0A0C4DH32 117 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 SHISA7A6NL88 538 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 PITX3O75364 302 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 TLE1Q04724 770 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 TLE4Q04727 773 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF154Q13106 437 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 SMAD4Q13485 552 aaKnown RBP11.33□□□□□ -0.6
TVP23A-201ENST00000299866 C1orf189Q5VU69 101 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 RAB24Q969Q5 203 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 HLA-HP01893 362 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 CD55P08174 381 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 CCL5P13501 91 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 PAX1P15863 534 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
TVP23A-201ENST00000299866 MTCP1P56278 107 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 DCAF7P61962 342 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 H3F3AP84243 136 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 NOGQ13253 232 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 DDIT4LQ96D03 193 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
TVP23A-201ENST00000299866 IGHV5-51A0A0C4DH38 117 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 A0A1W2PNR3 127 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 IGHG1P01857 330 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 MYOGP15173 224 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 HERV-K104P61576 105 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 MRPL13Q9BYD1 178 aaKnown RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF665Q9H7R5 613 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 B3GAT1Q9P2W7 334 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 LIPT2A6NK58 231 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 CYB5R3P00387 301 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF25P17030 456 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 CLN3Q13286 438 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 FAM90A2PQ658T7 463 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 RTL6Q6ICC9 239 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 NOXO1Q8NFA2 376 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 FAM131CQ96AQ9 280 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 Q96M66 194 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 HIST1H2AAQ96QV6 131 aa11.32□□□□□ -0.6
TVP23A-201ENST00000299866 PNRC2Q9NPJ4 139 aaKnown RBP11.32□□□□□ -0.6
TVP23A-201ENST00000299866 A0A1B0GU03 582 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 VSTM2BA6NLU5 285 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 B4DEV8 164 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 H3BP45 60 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 IL18BPO95998 194 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 CCL1P22362 96 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 MRGPRX1Q96LB2 322 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 WFIKKN1Q96NZ8 548 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 LAMP3Q9UQV4 416 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 ADAM20O43506 726 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 HBE1P02100 147 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 OR4A8P0C604 315 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 AADACP22760 399 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 MYBPHQ13203 477 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 P2RY6Q15077 328 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
TVP23A-201ENST00000299866 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
TVP23A-201ENST00000299866 SNHG12Q9BXW3 62 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 TMEM131Q92545 1883 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 DFFBO76075 338 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 CERS4Q9HA82 394 aa11.31□□□□□ -0.6
TVP23A-201ENST00000299866 C3orf85A0A1B0GTC6 90 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 EFNA2O43921 213 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 TMEM50AO95807 157 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 RND2P52198 227 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 LBX1P52954 281 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 ADIRFQ15847 76 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 CCDC71LQ8N9Z2 235 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
TVP23A-201ENST00000299866 FGF14Q92915 247 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 ALKBH4Q9NXW9 302 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 IFNL4K9M1U5 179 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 YPEL5P62699 121 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
TVP23A-201ENST00000299866 SLC16A14Q7RTX9 510 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms