RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TCRBV16S1A1N1A0A5B0 115 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PATE3B3GLJ2 98 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SLC35E4Q6ICL7 350 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 BHLHA9Q7RTU4 235 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CADM4Q8NFZ8 388 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ABHD3Q8WU67 409 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PRRC2BQ5JSZ5 2229 aaKnown RBP11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TEX50A0A1B0GTY4 177 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TTRP02766 147 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MGPP08493 103 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CDX4O14627 284 aaPredicted RBP11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PRRX1P54821 245 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SFTPA2Q8IWL1 248 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CDIPTO14735 213 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SNCGO76070 127 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 IGF2P01344 180 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 REG1BP48304 166 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 UCN2Q96RP3 112 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LHX9Q9NQ69 397 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TINAGQ9UJW2 476 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 KLHDC1Q8N7A1 406 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR4D9Q8NGE8 314 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PDCD6O75340 191 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RNF165Q6ZSG1 346 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SLC16A13Q7RTY0 426 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LILRB1Q8NHL6 650 aaPredicted RBP11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 R3HDM4Q96D70 268 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM33P57088 247 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FAM162BQ5T6X4 162 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PRSS42Q7Z5A4 293 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HAND1O96004 215 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR4A8P0C604 315 aa11.98□□□□□ -0.49
CHRFAM7A-201ENST00000299847 EPHA8P29322 1005 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CEBPDP49716 269 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZAR1Q86SH2 424 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 GAPTQ8N292 157 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR10A7Q8NGE5 316 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF707Q96C28 371 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 IGLV3-16A0A075B6K0 115 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 M0R2Z0 102 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MDH2P40926 338 aaKnown RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NXPH1P58417 271 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PTPMT1Q8WUK0 201 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NEURL2Q9BR09 285 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 WNT5AP41221 380 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ALG14Q96F25 216 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RAB40CQ96S21 281 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SLC45A2Q9UMX9 530 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ANKRD20A5PA0PJZ0 165 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PCMT1P22061 227 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RAB7AP51149 207 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LIAT1Q6ZQX7 453 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LINC00299Q6ZSB3 139 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MS4A10Q96PG2 267 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HDHD3Q9BSH5 251 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMSB15BA0A087X1C1 80 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 hADV38S2A0JD32 116 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RHBDL1O75783 438 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RPL29P47914 159 aaKnown RBP11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RNF212Q495C1 297 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 DHRS11Q6UWP2 260 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HMGCLL1Q8TB92 370 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 C19orf43Q9BQ61 176 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PLAC1Q9HBJ0 212 aa11.97□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CHST1O43916 411 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CCL3P10147 92 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PMELP40967 661 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PSG5Q15238 335 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PGA3P0DJD8 388 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MGAT2Q10469 447 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF488Q96MN9 340 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ASCL3Q9NQ33 180 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CCL28Q9NRJ3 127 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 AP5S1Q9NUS5 200 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 AMDHD2Q9Y303 409 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 C1QCP02747 245 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CLLU1Q5K131 121 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NSUN5P2Q63ZY6 315 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PDPNQ86YL7 162 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR1L6Q8NGR2 347 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ANGPTL6Q8NI99 470 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FAM210BQ96KR6 192 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SLC35B3Q9H1N7 401 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 STARD10Q9Y365 291 aa11.96□□□□□ -0.49
CHRFAM7A-201ENST00000299847 A0A1W2PN81 502 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 S100A8P05109 93 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 CLEC18BQ6UXF7 455 aa11.96□□□□□ -0.5
CHRFAM7A-201ENST00000299847 RND1Q92730 232 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms