RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TUBG1P23258 451 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 RPL35P42766 123 aaKnown RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 PSG7Q13046 419 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 BATF2Q8N1L9 274 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 OR5H2Q8NGV7 314 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 KLF14Q8TD94 323 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 MARS2Q96GW9 593 aaKnown RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 FAAP24Q9BTP7 215 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 RTL8AQ9BWD3 113 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF701Q9NV72 531 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-202ENST00000297979 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
C9orf3-202ENST00000297979 IGHV2OR16-5A0A0B4J2B6 119 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 PDCD6O75340 191 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ANXA3P12429 323 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 CXCL3P19876 107 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 HOXA1P49639 335 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 TAS2R46P59540 309 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FGF12P61328 243 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 NOXA1Q86UR1 476 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 CCDC107Q8WV48 283 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 CLUHP3Q96NS8 147 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 SULT4A1Q9BR01 284 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 RANBP3Q9H6Z4 567 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A10PA6NDY2 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A18PA6NE21 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A16PA6NEW6 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A20PA6NIJ5 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A8PA6NJQ4 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A7PA6NKC0 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A22PA8MWA6 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A12PA8MX19 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A5PA8MXJ8 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A23PA8MXZ1 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 SYNGR1O43759 233 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A15PP0C7V4 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A13PP0C7W8 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A14PP0C7W9 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 FAM90A24PP0C7X0 464 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 BMP5P22003 454 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 MPV17P39210 176 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ATPAF1Q5TC12 328 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 PKIBQ9C010 78 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 OR51I2Q9H344 312 aa12.18□□□□□ -0.46
C9orf3-202ENST00000297979 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-202ENST00000297979 EEF1E1-BLOC1S5C9J1V9 151 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 SLC25A17O43808 307 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 C1QBP02746 253 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 IL24Q13007 206 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 TMED4Q7Z7H5 227 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 MAFIPQ8WZ33 124 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 CMSS1Q9BQ75 279 aaKnown RBP12.17□□□□□ -0.46
C9orf3-202ENST00000297979 HDHD3Q9BSH5 251 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-202ENST00000297979 CHST6Q9GZX3 395 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 A0A0G2JNJ9 132 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 UBE2QL1A1L167 161 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 A8MXE2 369 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 OR7C1O76099 320 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-202ENST00000297979 CALCRP30988 508 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 AKR1D1P51857 326 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 RBPJQ06330 500 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 DAZAP2Q15038 168 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-202ENST00000297979 ALKBH6Q3KRA9 238 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 C1orf174Q8IYL3 243 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 ZDHHC22Q8N966 263 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 MRGPRFQ96AM1 343 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 MUCL1Q96DR8 90 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 MYOZ1Q9NP98 299 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-202ENST00000297979 Q9UFV3 132 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 VSIG4Q9Y279 399 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 PRELID3BQ9Y3B1 194 aa12.17□□□□□ -0.46
C9orf3-202ENST00000297979 MEIKINA0A087WXM9 373 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 A0A1B0GV90 55 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 F8VVB4 439 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 F8VWA3 439 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 J3QT63 122 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 FUT3P21217 361 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 PDCD1Q15116 288 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 MRGPRGQ86SM5 289 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 FAM216AQ8WUB2 273 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 PURGQ9UJV8 347 aaKnown RBP12.16□□□□□ -0.46
C9orf3-202ENST00000297979 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 OR2AT4A6NND4 320 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 DTYMKP23919 212 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 ZNF83P51522 516 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 NAAAQ02083 359 aa12.16□□□□□ -0.46
C9orf3-202ENST00000297979 C3orf36Q3SXR2 165 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms