RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 PPT1P50897 306 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 IDH3GP51553 393 aaPredicted RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 VAX1Q5SQQ9 334 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF611Q8N823 705 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 OR4A4PQ8NGN8 299 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 CNTNAP3BQ96NU0 1288 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 MAGT1Q9H0U3 335 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 SH3BGRL2Q9UJC5 107 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 OSGIN2Q9Y236 505 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 LRBAP50851 2863 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 MSTNO14793 375 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 SYNGR1O43759 233 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 SYNGR3O43761 229 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 IFNA21P01568 189 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 PVALBP20472 110 aaPredicted RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 THBS4P35443 961 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 RBP2P50120 134 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 NSUN5P2Q63ZY6 315 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 SECTM1Q8WVN6 248 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 EMG1Q92979 244 aaKnown RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 NMES1Q9C002 83 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF552Q9H707 407 aaPredicted RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 ANXA10Q9UJ72 324 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 RCL1Q9Y2P8 373 aaKnown RBP11.69□□□□□ -0.54
TTC39B-201ENST00000297615 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 KIAA1549Q9HCM3 1950 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 USF3Q68DE3 2245 aa11.69□□□□□ -0.54
TTC39B-201ENST00000297615 PHF1O43189 567 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 VAMP5O95183 116 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 SYNGR4O95473 234 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF728P0DKX0 622 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 TBPP20226 339 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 CA6P23280 308 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 LSM6P62312 80 aaKnown RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 FAM3AP98173 230 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 CLINT1Q14677 625 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 SWI5Q1ZZU3 235 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 STOML3Q8TAV4 291 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 RTN4IP1Q8WWV3 396 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 RAB18Q9NP72 206 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 MED9Q9NWA0 146 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 BCL3P20749 454 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 TMEM33P57088 247 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 PP6455Q8WZ26 134 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 RHOFQ9HBH0 211 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 H7C2Y5 167 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 SNAPC5O75971 98 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 DAOP14920 347 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF16P17020 682 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 ACP1P24666 158 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 MRPS34P82930 218 aaKnown RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 TRA2AQ13595 282 aaKnown RBP eCLIP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 PNLIPRP3Q17RR3 467 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 FAM122CQ6P4D5 195 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 Q6ZRG5 221 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 MRPL21Q7Z2W9 205 aaKnown RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 RNF138Q8WVD3 245 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 INTS12Q96CB8 462 aaKnown RBP11.68□□□□□ -0.54
TTC39B-201ENST00000297615 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 BCL2L14Q9BZR8 327 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 C1orf123Q9NWV4 160 aa11.68□□□□□ -0.54
TTC39B-201ENST00000297615 GJE1A6NN92 205 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF732B4DXR9 585 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 PRF1P14222 555 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 ZNF708P17019 499 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 PLA2G5P39877 138 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 CEBPDP49716 269 aaPredicted RBP11.67□□□□□ -0.54
TTC39B-201ENST00000297615 TLE1Q04724 770 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 AKR1E2Q96JD6 320 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 COL5A1P20908 1838 aaPredicted RBP11.67□□□□□ -0.54
TTC39B-201ENST00000297615 A0A087WZY1 265 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 SERPINE3A8MV23 424 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 ETV2O00321 342 aaPredicted RBP11.67□□□□□ -0.54
TTC39B-201ENST00000297615 GRPP07492 148 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 OR8U9P0C7N5 309 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 LTC4SQ16873 150 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 SVBPQ8N300 66 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 SH2D2AQ9NP31 389 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 AMDHD2Q9Y303 409 aa11.67□□□□□ -0.54
TTC39B-201ENST00000297615 MEMO1Q9Y316 297 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms