RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 LANCL3Q6ZV70 420 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 CTHRC1Q96CG8 243 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 TMEM184BQ9Y519 407 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-201ENST00000297423 SPEGQ15772 3267 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 ABCA7Q8IZY2 2146 aa13.03□□□□□ -0.32
SPIDR-201ENST00000297423 RBMXL2O75526 392 aaKnown RBP13.02□□□□□ -0.32
SPIDR-201ENST00000297423 OR7C1O76099 320 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-201ENST00000297423 HSF1Q00613 529 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 EWSR1Q01844 656 aaKnown RBP eCLIP13.02□□□□□ -0.32
SPIDR-201ENST00000297423 ZNF154Q13106 437 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 SLC10A1Q14973 349 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 RNF151Q2KHN1 245 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 ETFRF1Q6IPR1 90 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 OR2C3Q8N628 320 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 GALNT14Q96FL9 552 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 HIST1H2BLQ99880 126 aa13.02□□□□□ -0.32
SPIDR-201ENST00000297423 RBM24Q9BX46 236 aaKnown RBP13.02□□□□□ -0.32
SPIDR-201ENST00000297423 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 PLA2G3Q9NZ20 509 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 LAMTOR5O43504 91 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 IGFBP3P17936 291 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-201ENST00000297423 HSD11B2P80365 405 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 PIGLQ9Y2B2 252 aa13.02□□□□□ -0.33
SPIDR-201ENST00000297423 TNFSF14O43557 240 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 OR2J2O76002 312 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 DBHP09172 617 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 CD33P20138 364 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 HNF1AP20823 631 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 DYNLT3P51808 116 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 AADACL3Q5VUY0 350 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 OR8B12Q8NGG6 310 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM68Q96MH6 324 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF107Q9UII5 783 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 NKX2-6A6NCS4 301 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 GAPDHP04406 335 aaKnown RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 SLC6A8P48029 635 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 GABREP78334 506 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TLE4Q04727 773 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 LYSMD4Q5XG99 296 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF664Q8N3J9 261 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 DTD1Q8TEA8 209 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 PECRQ9BY49 303 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF665Q9H7R5 613 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TLCD2A6NGC4 264 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 IFNL4K9M1U5 179 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 HSD17B6O14756 317 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 BGLAPP02818 100 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 SMIM10L1P0DMW3 83 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 CCNOP22674 350 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 APOBEC1P41238 236 aaKnown RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 NXPH1P58417 271 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 TM4SF19Q96DZ7 209 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 SMIM10Q96HG1 83 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 HIST1H2AAQ96QV6 131 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 SLC25A31Q9H0C2 315 aa13.01□□□□□ -0.33
SPIDR-201ENST00000297423 HEATR1Q9H583 2144 aaKnown RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 PRRC2CQ9Y520 2896 aaKnown RBP13.01□□□□□ -0.33
SPIDR-201ENST00000297423 LMO7DNF2Z398 122 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 H7BYZ3 331 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 GUSBP08236 651 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 IAPPP10997 89 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 GPR3P46089 330 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 DAP3P51398 398 aaKnown RBP13□□□□□ -0.33
SPIDR-201ENST00000297423 FOXK1P85037 733 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF787Q6DD87 383 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 ABHD5Q8WTS1 349 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 A0A1W2PR77 199 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 PLPP3O14495 311 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 ZNHIT1O43257 154 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 PLEK2Q9NYT0 353 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 KLHL13Q9P2N7 655 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 GOLT1BQ9Y3E0 138 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 ELOA3CA0A087WX78 387 aaPredicted RBP13□□□□□ -0.33
SPIDR-201ENST00000297423 A0A1W2PNV4 684 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 M0R143 59 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 CFIP05156 583 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 FSTP19883 344 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 VAX1Q5SQQ9 334 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 KDF1Q8NAX2 398 aaPredicted RBP13□□□□□ -0.33
SPIDR-201ENST00000297423 OR51H1Q8NH63 302 aa13□□□□□ -0.33
SPIDR-201ENST00000297423 HSPB2A8KAH6 182 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 ROM1Q03395 351 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 HSPB2Q16082 182 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 CXorf66Q5JRM2 361 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-201ENST00000297423 DOCK7Q96N67 2140 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 CAPZBP47756 277 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 IZUMO4Q1ZYL8 232 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 GPR137CQ8N3F9 429 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 M1APQ8TC57 530 aa12.99□□□□□ -0.33
SPIDR-201ENST00000297423 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms