RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 FUT3P21217 361 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 AESQ08117 197 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 ACER2Q5QJU3 275 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 VWA1Q6PCB0 445 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 CDIPTO14735 213 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 MMP9P14780 707 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 TNFAIP6P98066 277 aaPredicted RBP13.64□□□□□ -0.23
FNDC1-201ENST00000297267 LRRC3BQ96PB8 259 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 WASHC3Q9Y3C0 194 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 TMEM33P57088 247 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 RHOBP62745 196 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 ZNF574Q6ZN55 896 aaPredicted RBP13.64□□□□□ -0.23
FNDC1-201ENST00000297267 MOGAT3Q86VF5 341 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 ZNF275Q9NSD4 429 aaPredicted RBP13.64□□□□□ -0.23
FNDC1-201ENST00000297267 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
FNDC1-201ENST00000297267 SIRT4Q9Y6E7 314 aaPredicted RBP13.64□□□□□ -0.23
FNDC1-201ENST00000297267 HNRNPA3P51991 378 aaKnown RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 GAPTQ8N292 157 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 OR4C5Q8NGB2 326 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 SLC26A1Q9H2B4 701 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 HDGFL3Q9Y3E1 203 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 PJVKQ0ZLH3 352 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 S100A7AQ86SG5 101 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 TECRQ9NZ01 308 aaKnown RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 MICBQ29980 383 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 MRPL24Q96A35 216 aaKnown RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 APOBEC3DQ96AK3 386 aaPredicted RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 CCL28Q9NRJ3 127 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 KCNIP2Q9NS61 270 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 CLN8Q9UBY8 286 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 CACNA1CQ13936 2221 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 TDRD6O60522 2096 aaKnown RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 HEXAP06865 529 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 RNFT1Q5M7Z0 435 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 OR10G4Q8NGN3 311 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 OR10G9Q8NGN4 311 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 OR10G7Q8NGN6 311 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 CNN1P51911 297 aaKnown RBP13.63□□□□□ -0.23
FNDC1-201ENST00000297267 RNF165Q6ZSG1 346 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 SARAFQ96BY9 339 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 WFIKKN1Q96NZ8 548 aa13.63□□□□□ -0.23
FNDC1-201ENST00000297267 FCN1O00602 326 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 CHST1O43916 411 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 MPLP40238 635 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 GNG4P50150 75 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 SLC35E4Q6ICL7 350 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 SMIM17P0DL12 118 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 RPL29P47914 159 aaKnown RBP13.62□□□□□ -0.23
FNDC1-201ENST00000297267 RAB35Q15286 201 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 COA4Q9NYJ1 87 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 PPIL1Q9Y3C6 166 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 IGHV3-72A0A0B4J1Y9 119 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 TTRP02766 147 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 AKIRIN1Q9H9L7 192 aaPredicted RBP13.62□□□□□ -0.23
FNDC1-201ENST00000297267 ANKRD20A5PA0PJZ0 165 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 NKX2-2O95096 273 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 VAMP5O95183 116 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 NHLH1Q02575 133 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 NHLH2Q02577 135 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 NHLRC2Q8NBF2 726 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 PTP4A1Q93096 173 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 LGALSLQ3ZCW2 172 aaPredicted RBP13.62□□□□□ -0.23
FNDC1-201ENST00000297267 ZNF561Q8N587 486 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 ELOVL1Q9BW60 279 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 GPR27Q9NS67 375 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 CLEC1BQ9P126 229 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 VSIG4Q9Y279 399 aa13.62□□□□□ -0.23
FNDC1-201ENST00000297267 PMS2P1A4D2B8 440 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 PSG2P11465 335 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 FA2HQ7L5A8 372 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 KLK13Q9UKR3 277 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 ZIC3O60481 467 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 OR5AL1P0C617 328 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 GABRA1P14867 456 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
FNDC1-201ENST00000297267 ATP5SQ99766 215 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 C19orf43Q9BQ61 176 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 DICER1Q9UPY3 1922 aaKnown RBP13.61□□□□□ -0.23
FNDC1-201ENST00000297267 MAP1LC3B2A6NCE7 125 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 SNX22Q96L94 193 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 NDFIP1Q9BT67 221 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 MAP1LC3BQ9GZQ8 125 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 RPEQ96AT9 228 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 ADAT3Q96EY9 351 aaPredicted RBP13.61□□□□□ -0.23
FNDC1-201ENST00000297267 ZMAT5Q9UDW3 170 aaKnown RBP13.61□□□□□ -0.23
FNDC1-201ENST00000297267 A0A1W2PPV9 198 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 ADH4P08319 380 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 FUT7Q11130 342 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 MRGPRFQ96AM1 343 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 TMEM18Q96B42 140 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 SPAARA0A1B0GVQ0 90 aa13.61□□□□□ -0.23
FNDC1-201ENST00000297267 FIGNL2A6NMB9 653 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms