RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 ADOQ96SZ5 270 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 WDR76Q9H967 626 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 CUTCQ9NTM9 273 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TECRQ9NZ01 308 aaKnown RBP10.41□□□□□ -0.74
SNIP1-201ENST00000296215 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SLIT2O94813 1529 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TRAV9-2A0A087WT02 112 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE12HA6NDE8 117 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 HHLA1C9JL84 531 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 NDUFS4O43181 175 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 UBE2G1P62253 170 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 RING1Q06587 406 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 Q6ZVH6 145 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 NHLRC2Q8NBF2 726 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SCAMP5Q8TAC9 235 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SLC6A18Q96N87 628 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 GPR84Q9NQS5 396 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 KBTBD11-OT1A0A1B0GTJ5 212 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GZMHP20718 246 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 TBPL1P62380 186 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SHHQ15465 462 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SCN9AQ15858 1988 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 CD300EQ496F6 205 aaPredicted RBP10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GLIPR1L1Q6UWM5 242 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM56Q96MV1 263 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 PMCHL2Q9BQD1 86 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF665Q9H7R5 613 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM56-RWDD3S4R434 201 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 DEDDO75618 318 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 MT-ND6P03923 174 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 PTGER4P35408 488 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.74
SNIP1-201ENST00000296215 RELBQ01201 579 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE2BQ13066 116 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE2EQ4V326 116 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
SNIP1-201ENST00000296215 WDYHV1Q96HA8 205 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 TRIB1Q96RU8 372 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 P2RX4Q99571 388 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 PRRG4Q9BZD6 226 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 CALHM2Q9HA72 323 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 NECAP2Q9NVZ3 263 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SPINT1O43278 529 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GZMMP51124 257 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 LILRA4P59901 499 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 EWSR1Q01844 656 aaKnown RBP eCLIP10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SPANXN5Q5MJ07 72 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 LY6G6FQ5SQ64 297 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SLC25A38Q96DW6 304 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 PERPQ96FX8 193 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 MRPL13Q9BYD1 178 aaKnown RBP10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 ST20Q9HBF5 79 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 GPR35Q9HC97 309 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 SLC17A4Q9Y2C5 497 aa10.4□□□□□ -0.74
SNIP1-201ENST00000296215 PTGER1P34995 402 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 CDKN2AP42771 156 aaKnown RBP10.4□□□□□ -0.75
SNIP1-201ENST00000296215 ARG2P78540 354 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 PLAURQ03405 335 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 LRRC10Q5BKY1 277 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 DGAT2L6Q6ZPD8 337 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 IMMP2LQ96T52 175 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 MMP25Q9NPA2 562 aa10.4□□□□□ -0.75
SNIP1-201ENST00000296215 ANKRD26Q9UPS8 1709 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 C9JQL5 133 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 NBEAP1P0C6P0 100 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 APOBEC3AP31941 199 aaPredicted RBP10.39□□□□□ -0.75
SNIP1-201ENST00000296215 GPR183P32249 361 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 RPS20P60866 119 aaKnown RBP10.39□□□□□ -0.75
SNIP1-201ENST00000296215 CTXN3Q4LDR2 81 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 FAM57BQ71RH2 274 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 LPAR4Q99677 370 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 WDR54Q9H977 334 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 DMRT3Q9NQL9 472 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 IGKV6D-41A0A0C4DH26 115 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 SAP30O75446 220 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 EN2P19622 333 aaPredicted RBP10.39□□□□□ -0.75
SNIP1-201ENST00000296215 METAP1P53582 386 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 PPP2CBP62714 309 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 PPP2CAP67775 309 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 ASPHD2Q6ICH7 369 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 MRPL54Q6P161 138 aaKnown RBP10.39□□□□□ -0.75
SNIP1-201ENST00000296215 OR2L13Q8N349 312 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 SLC25A22Q9H936 323 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF443Q9Y2A4 671 aaPredicted RBP10.39□□□□□ -0.75
SNIP1-201ENST00000296215 PSG9Q00887 426 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 ZG16BQ96DA0 208 aa10.39□□□□□ -0.75
SNIP1-201ENST00000296215 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 OTOL1A6NHN0 477 aaPredicted RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 ATXN7O15265 892 aaPredicted RBP10.38□□□□□ -0.75
SNIP1-201ENST00000296215 APCSP02743 223 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CT45A6P0DMU7 189 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CT45A5P0DMU8 189 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 CT45A7P0DMV0 189 aa10.38□□□□□ -0.75
SNIP1-201ENST00000296215 DYNLT3P51808 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms