RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 DOCK8Q8NF50 2099 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 MSTNO14793 375 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 OR2J2O76002 312 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 IDH3GP51553 393 aaPredicted RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF506Q5JVG8 444 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 RTL6Q6ICC9 239 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 CCDC71LQ8N9Z2 235 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 CLDND2Q8NHS1 167 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 MSI2Q96DH6 328 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 WFIKKN1Q96NZ8 548 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 CALHM2Q9HA72 323 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 GLRX2Q9NS18 164 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ALKBH4Q9NXW9 302 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 LAMP3Q9UQV4 416 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 TCRBV21S2A2A0A5A6 115 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 SHISA7A6NL88 538 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 CEBPZOSA8MTT3 80 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 RPL36A-HNRNPH2H7BZ11 118 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ADAM20O43506 726 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 GNRH1P01148 92 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 GZMBP10144 247 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 AADACP22760 399 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 GALNSP34059 522 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF41P51814 821 aaPredicted RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 EFNA3P52797 238 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 LRP11Q86VZ4 500 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 OR2AE1Q8NHA4 323 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 METTL9Q9H1A3 318 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF665Q9H7R5 613 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 RANBP2P49792 3224 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 XKRY2A2RUG3 117 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 RRP8O43159 456 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 PITX3O75364 302 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 HBE1P02100 147 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 AMBPP02760 352 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 FBLP22087 321 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 LMO1P25800 156 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 TNFRSF4P43489 277 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 CAPZBP47756 277 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ERVS71-1P61550 626 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 H3F3AP84243 136 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 FOXO1Q12778 655 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 PIGYQ3MUY2 71 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 DBX2Q6ZNG2 339 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 MRPL41Q8IXM3 137 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 DEFB119Q8N690 84 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 OR1N1Q8NGS0 311 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 OR4X1Q8NH49 305 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 REPIN1Q9BWE0 567 aaKnown RBP8.93□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF442Q9H7R0 627 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 KLHL13Q9P2N7 655 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 TP53TG5Q9Y2B4 290 aa8.93□□□□□ -0.98
LMX1A-201ENST00000294816 FOXI3A8MTJ6 420 aaPredicted RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 A8MWP6 167 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 CD81P60033 236 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 GRB2P62993 217 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 JOSD1Q15040 202 aaPredicted RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 C5orf24Q7Z6I8 188 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 NAT6Q93015 286 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 RBMXL1Q96E39 390 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 GNPNAT1Q96EK6 184 aaPredicted RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF286AQ9HBT8 521 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 B3GAT1Q9P2W7 334 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 C3orf85A0A1B0GTC6 90 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ANKUB1A6NFN9 424 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 DHRS3O75911 302 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 PGA3P0DJD8 388 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 CLDN17P56750 224 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 COL10A1Q03692 680 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 C17orf67Q0P5P2 114 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 CLN3Q13286 438 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF787Q6DD87 383 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ZNF66Q6ZN08 573 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 DTX1Q86Y01 620 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OR5T1Q8NG75 326 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OR5R1Q8NH85 324 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM37Q8WXS4 190 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 ST8SIA1Q92185 356 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 Q96M66 194 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM68Q96MH6 324 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 RBM14Q96PK6 669 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 GABRG3Q99928 467 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 TM2D1Q9BX74 207 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 MRPL37Q9BZE1 423 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 CBLN4Q9NTU7 201 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OBP2AQ9NY56 170 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 DKKL1Q9UK85 242 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 PROB1E7EW31 1015 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 DFFBO76075 338 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 BTF3P20290 206 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 NUTF2P61970 127 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 RPS18P62269 152 aaKnown RBP8.92□□□□□ -0.98
LMX1A-201ENST00000294816 SLC10A1Q14973 349 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 TMEM183AQ8IXX5 376 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OR10A7Q8NGE5 316 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OR4D5Q8NGN0 318 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
LMX1A-201ENST00000294816 LMX1AQ8TE12 382 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms