RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 ZNF442Q9H7R0 627 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 SLC2A9Q9NRM0 540 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 FBXL17Q9UF56 701 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 DNAJC13O75165 2243 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF407Q9C0G0 2248 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 ATP6V1G2-DDX39BF2Z307 99 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 OR7C1O76099 320 aaPredicted RBP12.99□□□□□ -0.33
CCDC116-201ENST00000292779 CST4P01036 141 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 CCL2P13500 99 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 FUT3P21217 361 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 CLDN18P56856 261 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 IL34Q6ZMJ4 242 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 LYZL2Q7Z4W2 148 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 TUSC5Q8IXB3 177 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 SVBPQ8N300 66 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 OR5L1Q8NGL2 311 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 OR11L1Q8NGX0 322 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 SAT2Q96F10 170 aaPredicted RBP12.99□□□□□ -0.33
CCDC116-201ENST00000292779 CALHM2Q9HA72 323 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 AMDHD2Q9Y303 409 aa12.99□□□□□ -0.33
CCDC116-201ENST00000292779 FAM166BA8MTA8 275 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 F8W036 122 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 MED6O75586 246 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 HLA-HP01893 362 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 MBPP02686 304 aaPredicted RBP12.98□□□□□ -0.33
CCDC116-201ENST00000292779 NME2P22392 152 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 ITGA3P26006 1051 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 MAGEA5P43359 124 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 LPAR6P43657 344 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 FOXG1P55316 489 aaPredicted RBP12.98□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM33P57088 247 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM268Q5VZI3 342 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 EIF5AL1Q6IS14 154 aaKnown RBP12.98□□□□□ -0.33
CCDC116-201ENST00000292779 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 MOB3AQ96BX8 217 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 ADAT1Q9BUB4 502 aaKnown RBP12.98□□□□□ -0.33
CCDC116-201ENST00000292779 PAPOLGQ9BWT3 736 aaKnown RBP12.98□□□□□ -0.33
CCDC116-201ENST00000292779 SMIM3Q9BZL3 60 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 LINC00470Q9BZP3 86 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 STARD10Q9Y365 291 aa12.98□□□□□ -0.33
CCDC116-201ENST00000292779 TM4SF5O14894 197 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 TPD52L2O43399 206 aaKnown RBP12.97□□□□□ -0.33
CCDC116-201ENST00000292779 FBXO24O75426 580 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 OR1C1Q15619 314 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 DCAF10Q5QP82 559 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 C10orf91Q5T1B1 145 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM164Q5U3C3 297 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 TMEM211Q6ICI0 200 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 LIAT1Q6ZQX7 453 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 GPR87Q9BY21 358 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 TLNRD1Q9H1K6 362 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 MED13Q9UHV7 2174 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 C5orf49A4QMS7 147 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 ZNF503-AS2A6NEH8 195 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 CTRB1P17538 263 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 AADACP22760 399 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 LINC00696Q6ZRV3 163 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 C18orf12Q96KH6 178 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 REPIN1Q9BWE0 567 aaKnown RBP12.97□□□□□ -0.33
CCDC116-201ENST00000292779 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 FGF23Q9GZV9 251 aaPredicted RBP12.97□□□□□ -0.33
CCDC116-201ENST00000292779 RHOFQ9HBH0 211 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 ATPIF1Q9UII2 106 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 FAM96BQ9Y3D0 163 aa12.97□□□□□ -0.33
CCDC116-201ENST00000292779 PQLC2LA1A4F0 135 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 JTBO76095 146 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 DIRAS3O95661 229 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 BCL3P20749 454 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 GLP1RP43220 463 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 SULT1A2P50226 295 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 PRDX4Q13162 271 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 IGSF11Q5DX21 431 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 OR5T2Q8NGG2 359 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 MSI2Q96DH6 328 aaKnown RBP12.96□□□□□ -0.33
CCDC116-201ENST00000292779 PRRG4Q9BZD6 226 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 UQCC1Q9NVA1 299 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
CCDC116-201ENST00000292779 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
CCDC116-201ENST00000292779 C21orf140B9A014 251 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 H7C1Q1 480 aa12.96□□□□□ -0.34
CCDC116-201ENST00000292779 SYNGR4O95473 234 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms