RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 TNFRSF9Q07011 255 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 GLIPR1L1Q6UWM5 242 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SULF2Q8IWU5 870 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CA5BP1Q8WTZ4 195 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 KLHDC3Q9BQ90 382 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 ACTR3CQ9C0K3 210 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 STRADBQ9C0K7 418 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SCDO00767 359 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CLPSP04118 112 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SNRPCP09234 159 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 H2BFMP0C1H6 154 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 NOVA1P51513 510 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 FUT7Q11130 342 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SLC10A1Q14973 349 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 SGCBQ16585 318 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 PLXDC2Q6UX71 529 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 ADAT3Q96EY9 351 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 URM1Q9BTM9 101 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 TXNIPQ9H3M7 391 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 KIAA1456Q9P272 454 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 MRPS28Q9Y2Q9 187 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 COA3Q9Y2R0 106 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 PTRH2Q9Y3E5 179 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 PIEZO2Q9H5I5 2752 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 TRAV36DV7A0A075B6V5 113 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CCDC187A0A096LP49 1063 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 C17orf51A8MQB3 221 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 H0YL77 283 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CDC14BO60729 498 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 TNFSF15O95150 251 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 MT-ATP6P00846 226 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 MBPP02686 304 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 HSPB1P04792 205 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CELA2AP08217 269 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 GZMBP10144 247 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 TMEM50BP56557 158 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 RND3P61587 244 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 NHLH1Q02575 133 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CHRFAM7AQ494W8 412 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 CDCP2Q5VXM1 449 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 RCC1LQ96I51 464 aaKnown RBP9.18□□□□□ -0.94
ERCC3-201ENST00000285398 ARHGAP5-AS1Q96IT6 56 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 DDA1Q9BW61 102 aa9.18□□□□□ -0.94
ERCC3-201ENST00000285398 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 MED12Q93074 2177 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 LOC101059948A0A1B0GTJ6 334 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 CDRT15L2A8MXV6 281 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 RAD51DO75771 328 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 DDAH2O95865 285 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 RPP30P78346 268 aaKnown RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 H3F3AP84243 136 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 TMEM183AQ8IXX5 376 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 MRPL24Q96A35 216 aaKnown RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 SLC25A36Q96CQ1 311 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 CENPMQ9NSP4 180 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 DKKL1Q9UK85 242 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 NSG1A0A0A6YYJ2 146 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 MED19A0JLT2 244 aaPredicted RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 KLF7O75840 302 aaPredicted RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 MPZL1O95297 269 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 ZNF20P17024 532 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 TCN2P20062 427 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 KLK2P20151 261 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 SLC37A1P57057 533 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 IL13RA2Q14627 380 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 KLHL24Q6TFL4 600 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 ADAMTS18Q8TE60 1221 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 ZNF721Q8TF20 911 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 NXF5Q9H1B4 397 aaKnown RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 TMEM242Q9NWH2 141 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 OR14J1Q9UGF5 321 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
ERCC3-201ENST00000285398 WSB1Q9Y6I7 421 aa9.17□□□□□ -0.94
ERCC3-201ENST00000285398 CPAMD8Q8IZJ3 1885 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 FREM3P0C091 2139 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 CRYM-AS1A6NIL9 109 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 A6NIZ1 184 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 IGHMP01871 453 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 MBP02144 154 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 TTRP02766 147 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 CTSDP07339 412 aaPredicted RBP9.16□□□□□ -0.94
ERCC3-201ENST00000285398 UMODP07911 640 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 SLC6A8P48029 635 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 RAP1BP61224 184 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 ZNF266Q14584 549 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 HAGHQ16775 308 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 DNM1P34Q6PK57 102 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 C9orf40Q8IXQ3 194 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 DNAJA3Q96EY1 480 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 SNX22Q96L94 193 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 GPR87Q9BY21 358 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 BANF2Q9H503 90 aa9.16□□□□□ -0.94
ERCC3-201ENST00000285398 MMACHCQ9Y4U1 282 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms