RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 OOEPA6NGQ2 149 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 FAM74A7A6NL05 159 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 M0R296 226 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF841Q6ZN19 808 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 MED29Q9NX70 200 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 IFITM10A6NMD0 228 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 KCNMB1Q16558 191 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 MORN1Q5T089 497 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 PRSS42Q7Z5A4 293 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CALHM1Q8IU99 346 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 OR4P4Q8NGL7 312 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 NARFLQ9H6Q4 476 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CDC42EP3Q9UKI2 254 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 FBLL1A6NHQ2 334 aaKnown RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 FGF17O60258 216 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 DHRS3O75911 302 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ACAA1P09110 424 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 INHBBP09529 407 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ERVS71-1P61550 626 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 IGSF11Q5DX21 431 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 YIPF6Q96EC8 236 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 LRP12Q9Y561 859 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 POLR2AP24928 1970 aaKnown RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ACTL6AO96019 429 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 OR4A8P0C604 315 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 DNLZQ5SXM8 178 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 PAQR6Q6TCH4 344 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 KMT2EQ8IZD2 1858 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 SHISA7A6NL88 538 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 NGFP01138 241 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 OTOSQ8NHW6 89 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 TOX2Q96NM4 488 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 LOC107984156A0A0G2JMH3 177 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 A0A1W2PR48 441 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 TCF21O43680 179 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 GNG7O60262 68 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 Q6ZSR9 355 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ARL17AQ8IVW1 177 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CYSLTR2Q9NS75 346 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CES1P1Q9UKY3 287 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 C10orf113Q5VZT2 155 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 AFMIDQ63HM1 303 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF519Q8TB69 540 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 PCNX1Q96RV3 2341 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 IGHV3-15A0A0B4J1V0 119 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CXorf1O96002 111 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 HIST1H1DP16402 221 aaKnown RBP7.8□□□□□ -1.16
NIPBL-201ENST00000282516 EMDP50402 254 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 PRSS8Q16651 343 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 ARHGAP5-AS1Q96IT6 56 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 HCFC2Q9Y5Z7 792 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 CEACAM16Q2WEN9 425 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 CXorf67Q86X51 503 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-201ENST00000282516 CDX2Q99626 313 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-201ENST00000282516 GPA33Q99795 319 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 B9D1Q9UPM9 204 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 CXCL13O43927 109 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SRSF10O75494 262 aaKnown RBP7.79□□□□□ -1.16
NIPBL-201ENST00000282516 NMUP48645 174 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 DPTQ07507 201 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 TNXAQ16473 311 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 AUP1Q9Y679 476 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 GALP22466 123 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 TCL1AP56279 114 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 BSXQ3C1V8 233 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SHANK1Q9Y566 2161 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 FOCADQ5VW36 1801 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 RER1O15258 196 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 CDX1P47902 265 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-201ENST00000282516 FOXF1Q12946 379 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SLC25A35Q3KQZ1 300 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 OR8I2Q8N0Y5 310 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM204Q9BSN7 226 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 PRNDQ9UKY0 176 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 NPIPB6E9PJ23 425 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 NAT1P18440 290 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 COX7A1P24310 79 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SPPL3Q8TCT6 385 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 FGF20Q9NP95 211 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-201ENST00000282516 PRSS50Q9UI38 385 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 OR2W5A6NFC9 320 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF253O75346 499 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 MPC2O95563 127 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 RNF224P0DH78 156 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 AVPR2P30518 371 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SCAND1P57086 179 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 KLRB1Q12918 225 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 MCHR2Q969V1 340 aa7.79□□□□□ -1.16
NIPBL-201ENST00000282516 SLC25A30Q5SVS4 291 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms