RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GNRHRP30968 328 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GABRA3P34903 492 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF117Q03924 483 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SLAQ13239 276 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SLC17A1Q14916 467 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 AMMECR1LQ6DCA0 310 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 BHLHA15Q7RTS1 189 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 CADM4Q8NFZ8 388 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 OR10W1Q8NGF6 305 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 CNRIP1Q96F85 164 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF764Q96H86 408 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 INSL5Q9Y5Q6 135 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SDCBPO00560 298 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 TSPAN6O43657 245 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 OR7C2O60412 319 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 ALOX5APP20292 161 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 CRYBA4P53673 196 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SMAD3P84022 425 aaKnown RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 UNC119Q13432 240 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 C11orf40Q8WZ69 217 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 CYYR1Q96J86 154 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 G6PC2Q9NQR9 355 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 LRIT1Q9P2V4 623 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 PXMP4Q9Y6I8 212 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 DOCK9Q9BZ29 2069 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 COL4A3Q01955 1670 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GJE1A6NN92 205 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SH2D1BO14796 132 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 RBFOX2O43251 390 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GALR2O43603 387 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 C1orf105O95561 183 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 HBE1P02100 147 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 BCL2P10415 239 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 IGFBP3P17936 291 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GRK6P43250 576 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 RAC3P60763 192 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SNRPD1P62314 119 aaKnown RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 CDC20BQ86Y33 519 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 TCEAL8Q8IYN2 117 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 OR1N2Q8NGR9 330 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 ASB10Q8WXI3 467 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 VN1R1Q9GZP7 353 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 FBXL7Q9UJT9 491 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 DHDHQ9UQ10 334 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 VDAC3Q9Y277 283 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 KIAA0100Q14667 2235 aaKnown RBP8.04□□□□□ -1.12
PDGFC-201ENST00000274071 PPIAL4EA0A075B759 164 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 TRAV26-1A0A087WT03 109 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PPIAL4CA0A0B4J2A2 164 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 OR2T8A6NH00 312 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PPIAL4DF5H284 164 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PPIAL4FP0DN26 164 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ANOS1P23352 680 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 CDKN2AP42771 156 aaKnown RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 EWSR1Q01844 656 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF266Q14584 549 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 MRPL2Q5T653 305 aaKnown RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 TXNDC8Q6A555 127 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 FAM71F2Q6NXP2 309 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 DPY19L4Q7Z388 723 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 RHBDD1Q8TEB9 315 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PSMF1Q92530 271 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ATP5SQ99766 215 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PNO1Q9NRX1 252 aaKnown RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF586Q9NXT0 402 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 IGHV2-26A0A0B4J1V2 119 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 TBL1XO60907 577 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 LRRC10Q5BKY1 277 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 C20orf196Q8IYI0 205 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 TMEM171Q8WVE6 324 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ALG14Q96F25 216 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 SLC25A44Q96H78 314 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-201ENST00000274071 UHRF2Q96PU4 802 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 AMELYQ99218 206 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PARLQ9H300 379 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF665Q9H7R5 613 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 FBRSQ9HAH7 460 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PLA2G3Q9NZ20 509 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PSG11Q9UQ72 335 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 RHBDD3Q9Y3P4 386 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 ENTPD2Q9Y5L3 495 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PDE4DIPQ5VU43 2346 aa8.03□□□□□ -1.12
PDGFC-201ENST00000274071 PROB1E7EW31 1015 aa8.02□□□□□ -1.13
PDGFC-201ENST00000274071 LDB3O75112 727 aa8.02□□□□□ -1.13
PDGFC-201ENST00000274071 SERF1AO75920 110 aa8.02□□□□□ -1.13
PDGFC-201ENST00000274071 TIMP1P01033 207 aa8.02□□□□□ -1.13
PDGFC-201ENST00000274071 ESDP10768 282 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms