RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 MSR1P21757 451 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ARF1P84077 181 aaKnown RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TLE1Q04724 770 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DCAF10Q5QP82 559 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 Q6ZRG5 221 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FGFBP3Q8TAT2 258 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 RNF128Q8TEB7 428 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 OR2A7Q96R45 310 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TUBG2Q9NRH3 451 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 HSPA12AO43301 675 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 RCC1P18754 421 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 CAMLGP49069 296 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MITD1Q8WV92 249 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 NXT1Q9UKK6 140 aaKnown RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 LOC100289279A0A1B0GTE1 492 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 E9PLN8 166 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TOX3O15405 576 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MBPP02686 304 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FGF5P12034 268 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MPPED2Q15777 294 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 B4GALT7Q9UBV7 327 aa12.36□□□□□ -0.43
TNFRSF11A-201ENST00000269485 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 IL5P05113 134 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 LIFP15018 202 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ACKR3P25106 362 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 PKIAP61925 76 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MAJINQ3KP22 176 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZNF441Q8N8Z8 693 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FAAP24Q9BTP7 215 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 NMNAT2Q9BZQ4 307 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FAM234AQ9H0X4 552 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 RIMS4Q9H426 269 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DOK5Q9P104 306 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZNF705FA8MVS1 300 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZNF705DP0CH99 300 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZNF705BP0CI00 300 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MEOX1P50221 254 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZNF343Q6P1L6 599 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MRPL21Q7Z2W9 205 aaKnown RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TAAR9Q96RI9 348 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 HAO2Q9NYQ3 351 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 BOKQ9UMX3 212 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 CYB5BO43169 146 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 TGOLN2O43493 480 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 RELQ04864 619 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MMP26Q9NRE1 261 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 LIPGQ9Y5X9 500 aa12.35□□□□□ -0.43
TNFRSF11A-201ENST00000269485 LOC390937A0A1W2PQ73 354 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ZIC3O60481 467 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 NGFP01138 241 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 CSF1P09603 554 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 EPHA1P21709 976 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 GPM6AP51674 278 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 THEM4Q5T1C6 240 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 OR4K15Q8NH41 348 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 PHB2Q99623 299 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 FOXB1Q99853 325 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 OMGP23515 440 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 BDH1Q02338 343 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 PLP2Q04941 152 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 NSUN5P2Q63ZY6 315 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 LIPHQ8WWY8 451 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ASB17Q8WXJ9 295 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 MCTS1Q9ULC4 181 aaKnown RBP12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 KPTNQ9Y664 436 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 SCGNO76038 276 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 SLC25A1P53007 311 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ACSM1Q08AH1 577 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 PCK2Q16822 640 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 DEFB108BQ8NET1 73 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
TNFRSF11A-201ENST00000269485 ANKRD20A5PA0PJZ0 165 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TCF21O43680 179 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SULT1A1P50225 295 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GABRG1Q8N1C3 465 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TAS2R8Q9NYW2 309 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms