RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SRP19P09132 144 aaKnown RBP14.3□□□□□ -0.12
GPC1-201ENST00000264039 APOBEC1P41238 236 aaKnown RBP14.3□□□□□ -0.12
GPC1-201ENST00000264039 C11orf42Q8N5U0 333 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 SERINC1Q9NRX5 453 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 ANXA10Q9UJ72 324 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 MKI67P46013 3256 aaKnown RBP14.29□□□□□ -0.12
GPC1-201ENST00000264039 IGKV1D-43A0A0B4J1Z2 117 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 CHST1O43916 411 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 G6PC2Q9NQR9 355 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 MT-ATP6P00846 226 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 IGHG1P01857 330 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 AMBPP02760 352 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 TK1P04183 234 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 CSNK1A1P48729 337 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 MALLQ13021 153 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 LBHQ53QV2 105 aaPredicted RBP14.29□□□□□ -0.12
GPC1-201ENST00000264039 FAM78BQ5VT40 261 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 OR4X1Q8NH49 305 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 MYOTQ9UBF9 498 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 TP53TG5Q9Y2B4 290 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 CD300LBA8K4G0 201 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 OPN1MWP04001 364 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 OPN1MW2P0DN77 364 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 OPN1MW3P0DN78 364 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 MCEMP1Q8IX19 187 aa14.29□□□□□ -0.12
GPC1-201ENST00000264039 GPX7Q96SL4 187 aaPredicted RBP14.29□□□□□ -0.12
GPC1-201ENST00000264039 IFNL4K9M1U5 179 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 TGFBR3Q03167 851 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 DLX2Q07687 328 aaPredicted RBP14.28□□□□□ -0.12
GPC1-201ENST00000264039 HIKESHIQ53FT3 197 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 FBXL14Q8N1E6 418 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 MRPL43Q8N983 215 aaKnown RBP14.28□□□□□ -0.12
GPC1-201ENST00000264039 SLC25A22Q9H936 323 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 RYDENQ9NUL5 291 aaKnown RBP14.28□□□□□ -0.12
GPC1-201ENST00000264039 TMED3Q9Y3Q3 217 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 IGLV1-36A0A0B4J1U3 117 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 NPSP0C0P6 89 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 SFTPCP11686 197 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 RAB4AP20338 218 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 BSXQ3C1V8 233 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 KCNIP4Q6PIL6 250 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 ATP5SQ99766 215 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 C2orf88Q9BSF0 95 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 SLC17A4Q9Y2C5 497 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 TRAPPC1Q9Y5R8 145 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 A0A0A6YYD4 124 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 WIPF3A6NGB9 483 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 PLPP3O14495 311 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 GZMBP10144 247 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 CLDN17P56750 224 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 GRINAQ7Z429 371 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 ZNF100Q8IYN0 542 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 VAMP8Q9BV40 100 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 PRSS50Q9UI38 385 aa14.28□□□□□ -0.12
GPC1-201ENST00000264039 SERPINE3A8MV23 424 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 CTSDP07339 412 aaPredicted RBP14.27□□□□□ -0.12
GPC1-201ENST00000264039 CELA2BP08218 269 aaPredicted RBP14.27□□□□□ -0.12
GPC1-201ENST00000264039 FSTP19883 344 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 NTF3P20783 257 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 SPEM2Q0P670 501 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 TMEM241Q24JQ0 296 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 FAM166AQ6J272 317 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 TMEM252Q8N6L7 170 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 C8orf44Q96CB5 159 aa14.27□□□□□ -0.12
GPC1-201ENST00000264039 C20orf202A1L168 122 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 GRIFINA4D1Z8 144 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 PRAMEF26H0Y7S4 382 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 AADACP22760 399 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 DMWDQ09019 674 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 MFAP5Q13361 173 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 ARSJQ5FYB0 599 aaPredicted RBP14.27□□□□□ -0.13
GPC1-201ENST00000264039 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 RNF166Q96A37 237 aaPredicted RBP14.27□□□□□ -0.13
GPC1-201ENST00000264039 SNHG12Q9BXW3 62 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 DOCK7Q96N67 2140 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 ZNHIT1O43257 154 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 CLDN1O95832 211 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 HIST1H3AP68431 136 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 FOXK1P85037 733 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 ROM1Q03395 351 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 JOSD1Q15040 202 aaPredicted RBP14.27□□□□□ -0.13
GPC1-201ENST00000264039 LINC00114Q6XXX2 140 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 ICE1Q9Y2F5 2266 aa14.27□□□□□ -0.13
GPC1-201ENST00000264039 A8MWP6 167 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 PSMB3P49720 205 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 SRSF4Q08170 494 aaKnown RBP14.26□□□□□ -0.13
GPC1-201ENST00000264039 IL13RA2Q14627 380 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 DOK3Q7L591 496 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 ERASQ7Z444 233 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 EXTL1Q92935 676 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 DDIT4LQ96D03 193 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 MTCL1Q9Y4B5 1905 aaKnown RBP14.26□□□□□ -0.13
GPC1-201ENST00000264039 IGHV3-64DA0A0J9YX35 117 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 MYOGP15173 224 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 EGR1P18146 543 aa14.26□□□□□ -0.13
GPC1-201ENST00000264039 EFNA3P52797 238 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms