RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 HEXAP06865 529 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 ENDOGQ14249 297 aaKnown RBP14.24□□□□□ -0.13
CTCF-201ENST00000264010 AWAT1Q58HT5 328 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 MKXQ8IYA7 352 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 ZNF2Q9BSG1 426 aaPredicted RBP14.24□□□□□ -0.13
CTCF-201ENST00000264010 SOX7Q9BT81 388 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 PECRQ9BY49 303 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 MYOZ1Q9NP98 299 aaPredicted RBP14.24□□□□□ -0.13
CTCF-201ENST00000264010 SLC2A8Q9NY64 477 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 DDTP30046 118 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 FUT6P51993 359 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 OR51F2Q8NH61 342 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 TRANK1O15050 2925 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 ZNF816-ZNF321PA0A0X1KG74 233 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 RAB4AP20338 218 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 TMEM123Q8N131 208 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 KIRREL1Q96J84 757 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 SNX22Q96L94 193 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 PLA2G3Q9NZ20 509 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 FBLN5Q9UBX5 448 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 A0A096LPE4 126 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 A0A1W2PPZ6 126 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 ANKRD30BLA7E2S9 258 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 C21orf140B9A014 251 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 ZNF728P0DKX0 622 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 FGF7P21781 194 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 GNMTQ14749 295 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 COMMD1Q8N668 190 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 OR13C8Q8NGS7 320 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 TMEM37Q8WXS4 190 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 DDA1Q9BW61 102 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 GAMTQ14353 236 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 SKA3Q8IX90 412 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 ZNF610Q8N9Z0 462 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 RAB39BQ96DA2 213 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 GUCD1Q96NT3 240 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 GPR61Q9BZJ8 451 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 GPR35Q9HC97 309 aa14.23□□□□□ -0.13
CTCF-201ENST00000264010 FAM212BQ9NTI7 297 aaPredicted RBP14.23□□□□□ -0.13
CTCF-201ENST00000264010 C7orf77A4D0Y5 90 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 GPR37O15354 613 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 BCL2L11O43521 198 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OPRM1P35372 400 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 DHRS13Q6UX07 377 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ETV3LQ6ZN32 361 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 C6orf201Q7Z4U5 140 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 RNF138Q8WVD3 245 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 TECTBQ96PL2 329 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 TRAPPC2LH3BP13 241 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 SFT2D2O95562 160 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 PTBP3O95758 552 aaKnown RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 ZNF883P0CG24 379 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR5H8P0DN80 308 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 P2RY4P51582 365 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 RAB11AP62491 216 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 PABPC1L2AQ5JQF8 200 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 VAX1Q5SQQ9 334 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ASPHD2Q6ICH7 369 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 MEX3BQ6ZN04 569 aaKnown RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 OSR2Q8N2R0 312 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR5AP2Q8NGF4 316 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR5L1Q8NGL2 311 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 GGACTQ9BVM4 153 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 DNAJB11Q9UBS4 358 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ZBTB25P24278 435 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 PJVKQ0ZLH3 352 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 SLC10A1Q14973 349 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 LURAP1LQ8IV03 231 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 PAQR4Q8N4S7 273 aaPredicted RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR6K3Q8NGY3 331 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ABHD3Q8WU67 409 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 TMEM9BQ9NQ34 198 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ZFP92A6NM28 416 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 RAB5AP20339 215 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 RRADP55042 308 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 UBE2NP61088 152 aaKnown RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 PPIAP62937 165 aaKnown RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 ADIRFQ15847 76 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 ZNF660Q6AZW8 331 aaPredicted RBP14.22□□□□□ -0.13
CTCF-201ENST00000264010 DNM1P46Q6ZS02 220 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR1J1Q8NGS3 322 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 OR2H1Q9GZK4 316 aa14.22□□□□□ -0.13
CTCF-201ENST00000264010 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 IAH1Q2TAA2 248 aaPredicted RBP14.21□□□□□ -0.13
CTCF-201ENST00000264010 DMRTA1Q5VZB9 504 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 TFAP2EQ6VUC0 442 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 HOGA1Q86XE5 327 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 ADAD2Q8NCV1 583 aaKnown RBP14.21□□□□□ -0.13
CTCF-201ENST00000264010 ZNF319Q9P2F9 582 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 COL4A2P08572 1712 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 CCL1P22362 96 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 CTSSP25774 331 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 C2orf68Q2NKX9 166 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 PHYHD1Q5SRE7 291 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 FBXL14Q8N1E6 418 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 ZNF845Q96IR2 970 aaPredicted RBP14.21□□□□□ -0.13
CTCF-201ENST00000264010 ST3GAL6Q9Y274 331 aa14.21□□□□□ -0.13
CTCF-201ENST00000264010 HEATR1Q9H583 2144 aaKnown RBP14.21□□□□□ -0.14
CTCF-201ENST00000264010 C5orf49A4QMS7 147 aa14.21□□□□□ -0.14
CTCF-201ENST00000264010 ZNF724A8MTY0 619 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms