RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 EIF1P41567 113 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 NPBWR2P48146 333 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 OR2C3Q8N628 320 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 OR14L1PQ8NHC6 308 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 NABP1Q96AH0 204 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 C19orf25Q9UFG5 118 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 POMT1Q9Y6A1 747 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 ARHGAP21Q5T5U3 1957 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 COL5A1P20908 1838 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 CACNA1EQ15878 2313 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 A0A0J9YW62 118 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF724A8MTY0 619 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 ADAM20O43506 726 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 LY86O95711 162 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 NR2C1P13056 603 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 RAB2AP61019 212 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 RPS23P62266 143 aaKnown RBP10.74□□□□□ -0.69
CHMP3-201ENST00000263856 IZUMO4Q1ZYL8 232 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 RTL6Q6ICC9 239 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 PRR18Q8N4B5 295 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 CCDC74BQ96LY2 380 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 PISDQ9UG56 409 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 CHCHD2Q9Y6H1 151 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-201ENST00000263856 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 AGAP20933 346 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 EIF2S3P41091 472 aaKnown RBP10.74□□□□□ -0.69
CHMP3-201ENST00000263856 NTNG2Q96CW9 530 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 BCO1Q9HAY6 547 aa10.74□□□□□ -0.69
CHMP3-201ENST00000263856 C3orf85A0A1B0GTC6 90 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 A0A1W2PQM1 296 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 PPYP01298 95 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 FOLR2P14207 255 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF92Q03936 586 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF154Q13106 437 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 HIST3H3Q16695 136 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 SLC16A14Q7RTX9 510 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 GPR137CQ8N3F9 429 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 UBALD1Q8TB05 177 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 PFDN5Q99471 154 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 SUCNR1Q9BXA5 334 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 TGIF2Q9GZN2 237 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 SLC7A10Q9NS82 523 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 R4GN57 208 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 DNAJC13O75165 2243 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 ZFP92A6NM28 416 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 H3BQ15 152 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 HLA-HP01893 362 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 TCN2P20062 427 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 DYNLT3P51808 116 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 TBC1D26Q86UD7 250 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 MYPOPQ86VE0 399 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CALHM1Q8IU99 346 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CYB561D1Q8N8Q1 229 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 RAB39BQ96DA2 213 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 MSI2Q96DH6 328 aaKnown RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 GINS3Q9BRX5 216 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 ZMAT5Q9UDW3 170 aaKnown RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 PRRC2CQ9Y520 2896 aaKnown RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CXCL13O43927 109 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 S100A2P29034 98 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 SLC25A53Q5H9E4 307 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 AKR1C8PQ5T2L2 129 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 OR1F12Q8NHA8 337 aa10.73□□□□□ -0.69
CHMP3-201ENST00000263856 CPNE4Q96A23 557 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-201ENST00000263856 C10orf142B7Z368 130 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 CYB5BO43169 146 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 EIF1BO60739 113 aaKnown RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF16P17020 682 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 TSC22D1Q15714 1073 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 KCNMB1Q16558 191 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 CEACAM16Q2WEN9 425 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 RNF212Q495C1 297 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 WDR74Q6RFH5 385 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF611Q8N823 705 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 SPSB1Q96BD6 273 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 BOD1Q96IK1 185 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 IL36RNQ9UBH0 155 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 STRAPQ9Y3F4 350 aaKnown RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 A0A096LPE4 126 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 A0A1W2PPZ6 126 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 RRP8O43159 456 aaKnown RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 RND3P61587 244 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 SRYQ05066 204 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 TMEM267Q0VDI3 215 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-201ENST00000263856 IL13RA2Q14627 380 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 AAED1Q7RTV5 226 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 ADPRHL1Q8NDY3 354 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 IL1F10Q8WWZ1 152 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 TCEAL7Q9BRU2 100 aa10.72□□□□□ -0.69
CHMP3-201ENST00000263856 GNG13Q9P2W3 67 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms