RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 RPS4Y1P22090 263 aaKnown RBP15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 B4GALNT1Q00973 533 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 MRM1Q6IN84 353 aaKnown RBP15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 CARFQ8N187 725 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 C10orf35Q96D05 121 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 OR2A5Q96R48 311 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 A0A1B0GTL3 188 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 MAP1LC3B2A6NCE7 125 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ZDHHC16Q969W1 377 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 TMPRSS13Q9BYE2 586 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 MAP1LC3BQ9GZQ8 125 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 WASHC3Q9Y3C0 194 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 TRAV34A0A0B4J273 112 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 TTRP02766 147 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 MEOX2P50222 304 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 OR2C3Q8N628 320 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ASPDHA6ND91 283 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 B4DEV8 164 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 SMIM6P0DI80 62 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 CD99P14209 185 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 DGAT2L7PQ6IED9 249 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ACSM6Q6P461 480 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 MRPL37Q9BZE1 423 aaKnown RBP15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 SLC6A13Q9NSD5 602 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 LPAR3Q9UBY5 353 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 SPTY2D1-AS1A0A0U1RR47 76 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ACP1P24666 158 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 CD81P60033 236 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ORAI1Q96D31 301 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 PRDM7Q9NQW5 492 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF275Q9NSD4 429 aaPredicted RBP15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 NAGKQ9UJ70 344 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF256Q9Y2P7 627 aaPredicted RBP15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 TMEM238LA0A1B0GVL6 79 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 A6NJY4 79 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 SLC6A1P30531 599 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 FAM74A3Q4VXF1 159 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 OR2D2Q9H210 308 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 PPIL1Q9Y3C6 166 aa15.55■□□□□ 0.08
NOTCH3-201ENST00000263388 SCN10AQ9Y5Y9 1956 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 AP4M1O00189 453 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 OR3A4PP47883 348 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 C21orf58P58505 322 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 RER1O15258 196 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 B2MP61769 119 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 Q3ZCU0 254 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 COX19Q49B96 90 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 CADM4Q8NFZ8 388 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 VN1R1Q9GZP7 353 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 CTDSPLO15194 276 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 PRKNO60260 465 aaPredicted RBP15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 CDC34P49427 236 aaPredicted RBP15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF343Q6P1L6 599 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 LYG1Q8N1E2 194 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 UFC1Q9Y3C8 167 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 PDCD6O75340 191 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 TMEM191AQ9H0A3 160 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF707Q96C28 371 aaPredicted RBP15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 LANCL1O43813 399 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 SOX15O60248 233 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 TP53RKQ96S44 253 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 SRSF9Q13242 221 aaKnown RBP eCLIP15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 INPP5JQ15735 1006 aaPredicted RBP15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 RAB24Q969Q5 203 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 RPEQ96AT9 228 aa15.54■□□□□ 0.08
NOTCH3-201ENST00000263388 ARFGEF3Q5TH69 2177 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 RBFOX3A6NFN3 312 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 K7EQS6 105 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 KLF7O75840 302 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 CNTD2Q9H8S5 307 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 PLPP3O14495 311 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 CXCL10P02778 98 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 OTPQ5XKR4 325 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF107Q9UII5 783 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 HOXC4P09017 264 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 G6PCP35575 357 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF117Q03924 483 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 SIGIRRQ6IA17 410 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 SLC35E4Q6ICL7 350 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 OR4D9Q8NGE8 314 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 OR52L2PQ8NGH6 319 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 OR4A4PQ8NGN8 299 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 IL21Q9HBE4 155 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 PLXND1Q9Y4D7 1925 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 NCOR1O75376 2440 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 PDPNQ86YL7 162 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 OR10V1Q8NGI7 309 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 CA6P23280 308 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 PRSS54Q6PEW0 395 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 ZNF793Q6ZN11 406 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 HSD17B13Q7Z5P4 300 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 BTLAQ7Z6A9 289 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 TMEM116Q8NCL8 245 aa15.53■□□□□ 0.08
NOTCH3-201ENST00000263388 TRAV17A0A0B4J275 112 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 FCGR3BO75015 233 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 COPS9Q8WXC6 57 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 DYNLT3P51808 116 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 TCTN1Q2MV58 587 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 MFRPQ9BY79 579 aa15.52■□□□□ 0.08
NOTCH3-201ENST00000263388 LY75O60449 1722 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms