RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 DSCR4P56555 118 aaPredicted RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 OR1L3Q8NH93 324 aa10.68□□□□□ -0.7
SMG6-201ENST00000263073 APOBEC3DQ96AK3 386 aaPredicted RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 FLYWCH2Q96CP2 140 aaKnown RBP10.68□□□□□ -0.7
SMG6-201ENST00000263073 ZNF98A6NK75 572 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 F5H697 171 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 CBR3O75828 277 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 BCL3P20749 454 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 IL13RA2Q14627 380 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 CD226Q15762 336 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 PLA2G2FQ9BZM2 168 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 MTCH2Q9Y6C9 303 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 PAPPAQ13219 1627 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 TRIP11Q15643 1979 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 A0A1W2PPC4 97 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 LINC00862A6NCI5 91 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 ACAA2P42765 397 aaKnown RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 IER3P46695 156 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 RAG2P55895 527 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 MICBQ29980 383 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 PIGYQ3MUY2 71 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 FAM209BQ5JX69 171 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 ZNF547Q8IVP9 402 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 GAPTQ8N292 157 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 EDARADDQ8WWZ3 215 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 HSD17B10Q99714 261 aaKnown RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 RPP25Q9BUL9 199 aaKnown RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 FSCN3Q9NQT6 498 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 GPR27Q9NS67 375 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 TNFSF15O95150 251 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 PGA3P0DJD8 388 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 C3AR1Q16581 482 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 NUFIP2Q7Z417 695 aaKnown RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 FKBP11Q9NYL4 201 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 NUP214P35658 2090 aaPredicted RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 DUXBA0A1W2PPF3 345 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 PAGE4O60829 102 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 LYZL6O75951 148 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 ZNF137PP52743 207 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 LYZP61626 148 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 FUT7Q11130 342 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 TTC9Q92623 222 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 RAB40CQ96S21 281 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 AKIRIN1Q9H9L7 192 aaPredicted RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 Q9N2K0 584 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 H3BVH4 76 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 HLA-DRB5Q30154 266 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 NPEPL1Q8NDH3 523 aa10.67□□□□□ -0.7
SMG6-201ENST00000263073 LYRM2Q9NU23 88 aaPredicted RBP10.67□□□□□ -0.7
SMG6-201ENST00000263073 NKX2-6A6NCS4 301 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 GSTZ1O43708 216 aaPredicted RBP10.66□□□□□ -0.7
SMG6-201ENST00000263073 GLB1P16278 677 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 FOXL2P58012 376 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 NEIL1Q96FI4 390 aaPredicted RBP10.66□□□□□ -0.7
SMG6-201ENST00000263073 CCL28Q9NRJ3 127 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 NEU3Q9UQ49 428 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 UFC1Q9Y3C8 167 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 CENPVL1A0A0U1RR11 272 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
SMG6-201ENST00000263073 SPSB1Q96BD6 273 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 TIMD4Q96H15 378 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 WFIKKN1Q96NZ8 548 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 NPTNQ9Y639 398 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 SLX4Q8IY92 1834 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 FAM60AQ9NP50 221 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 IGHV3-21A0A0B4J1V1 117 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 LRRC3CA6NJW4 275 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 GP1BAP07359 652 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 ID4P47928 161 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 CEBPDP49716 269 aaPredicted RBP10.66□□□□□ -0.7
SMG6-201ENST00000263073 GNG3P63215 75 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 OR11G2Q8NGC1 345 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 CHRDL1Q9BU40 450 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 KLK13Q9UKR3 277 aa10.66□□□□□ -0.7
SMG6-201ENST00000263073 KLF13Q9Y2Y9 288 aaPredicted RBP10.66□□□□□ -0.7
SMG6-201ENST00000263073 FAM157AC9JC47 383 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 GALP22466 123 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 CD40P25942 277 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMG6-201ENST00000263073 TMEM240Q5SV17 173 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 TBX19O60806 448 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 MUC1P15941 1255 aaPredicted RBP10.65□□□□□ -0.7
SMG6-201ENST00000263073 COX7A1P24310 79 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 PSG5Q15238 335 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 HIST3H3Q16695 136 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
SMG6-201ENST00000263073 CD300LDQ6UXZ3 194 aa10.65□□□□□ -0.7
SMG6-201ENST00000263073 OR10A7Q8NGE5 316 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms