RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 DCTN6O00399 190 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 PIN1P1O15428 100 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 PLA2G10O15496 165 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 ICMTO60725 284 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 ZDHHC23Q8IYP9 409 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 RND1Q92730 232 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 OR2H1Q9GZK4 316 aa7.21□□□□□ -1.25
PTPN3-201ENST00000262539 DUXBA0A1W2PPF3 345 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 LRRC3CA6NJW4 275 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 TSTD3H0UI37 97 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 RNASEK-C17orf49H0YIS7 233 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 COX7A2P2O60397 106 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PDCD6O75340 191 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 HTN1P15515 57 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 NANOS3P60323 173 aaKnown RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 HIST1H3AP68431 136 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 FAM166AQ6J272 317 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 HIST2H3AQ71DI3 136 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 OR2I1PQ8NGU4 316 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 MISP3Q96FF7 219 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 TTTY12Q9BZ98 90 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 G6PC2Q9NQR9 355 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PRKNO60260 465 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 ZIC3O60481 467 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 TMIGD3P0DMS9 266 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PPP3CBP16298 524 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 MGMTP16455 207 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 NPY4RP50391 375 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 FMODQ06828 376 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 Q1RN00 199 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 GSG1Q2KHT4 349 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PIP4P1Q86T03 277 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 SOX7Q9BT81 388 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 BANF2Q9H503 90 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 TMEM14DPA8MWL7 114 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 F5H697 171 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 CD74P04233 296 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 ZNF32P17041 273 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 IGFBP3P17936 291 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 RPL13AP40429 203 aaKnown RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PTGDSP41222 190 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 DGCR2P98153 550 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 SLC25A35Q3KQZ1 300 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 GLDNQ6ZMI3 551 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 IDO2Q6ZQW0 420 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 FAM169BQ8N8A8 192 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 OR10K1Q8NGX5 313 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 SEH1LQ96EE3 360 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 ADGRG7Q96K78 797 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 LPAR2Q9HBW0 351 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 FOXD3Q9UJU5 478 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 LAMP3Q9UQV4 416 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 POMT1Q9Y6A1 747 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 J3QT63 122 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 F2RL2O00254 374 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 IGHG3P01860 377 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 IL11P20809 199 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 NBL1P41271 181 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 CLDN12P56749 244 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 KLF9Q13886 244 aaPredicted RBP7.21□□□□□ -1.26
PTPN3-201ENST00000262539 LRRTM1Q86UE6 522 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 PRELID1Q9Y255 219 aa7.21□□□□□ -1.26
PTPN3-201ENST00000262539 HEATR5BQ9P2D3 2071 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TMEM210A6NLX4 147 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SOX15O60248 233 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 OPRM1P35372 400 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 UBE2KP61086 200 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TFAP2EQ6VUC0 442 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 FAM214BQ7L5A3 538 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SSX7Q7RTT5 188 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 BAGE2Q86Y30 109 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 ABHD1Q96SE0 405 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 LHFPL6Q9Y693 200 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 XKRY2A2RUG3 117 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 IFNL4K9M1U5 179 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 OR2F2O95006 317 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 CST4P01036 141 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 PTGFRP43088 359 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 PSMB3P49720 205 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 OR2F1Q13607 317 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 LGI3Q8N145 548 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 AMMECR1Q9Y4X0 333 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 CCL21O00585 134 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 RPS27AP62979 156 aaKnown RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SMIM21Q3B7S5 101 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 FAM122CQ6P4D5 195 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SLC36A1Q7Z2H8 476 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 RDH5Q92781 318 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TAAR6Q96RI8 345 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 SAV1Q9H4B6 383 aaPredicted RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 PATZ1Q9HBE1 687 aaKnown RBP7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TAAR3PQ9P1P4 343 aa7.2□□□□□ -1.26
PTPN3-201ENST00000262539 TOX4O94842 621 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms