RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RASL11BQ9BPW5 248 aa10.73□□□□□ -0.69
SPG11-201ENST00000261866 HILPDAQ9Y5L2 63 aa10.73□□□□□ -0.69
SPG11-201ENST00000261866 RREB1Q92766 1687 aa10.73□□□□□ -0.69
SPG11-201ENST00000261866 TRBV23-1A0A0A0MS06 115 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 TRAV38-1A0A0B4J264 116 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 XKRY2A2RUG3 117 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 JTBO76095 146 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 ARG1P05089 322 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 HMGN3Q15651 99 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 Q8IYB0 196 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 DYNC2LI1Q8TCX1 351 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 TMUB1Q9BVT8 246 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 SNRNP200O75643 2136 aaKnown RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 CGB1A6NKQ9 187 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 SERPINE3A8MV23 424 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.694e-7■■■■■ 30.9
SPG11-201ENST00000261866 TIAL1Q01085 375 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPG11-201ENST00000261866 NHLH1Q02575 133 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 NHLH2Q02577 135 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 SPSB1Q96BD6 273 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 ITPKCQ96DU7 683 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 ZNF385AQ96PM9 386 aaKnown RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 PLAC1Q9HBJ0 212 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 C16orf97H3BN30 126 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 H7BYZ3 331 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 FAM3AP98173 230 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 GPR35Q9HC97 309 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 USP54Q70EL1 1684 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 AESQ08117 197 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 LSM2Q9Y333 95 aaKnown RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 DLL1O00548 723 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 OR5AC1P0C628 307 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 DDOSTP39656 456 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 ASAH1Q13510 395 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
SPG11-201ENST00000261866 BCL2L2Q92843 193 aaPredicted RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 ZNF275Q9NSD4 429 aaPredicted RBP10.72□□□□□ -0.69
SPG11-201ENST00000261866 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 TOX3O15405 576 aaPredicted RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 PRF1P14222 555 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 SLC25A1P53007 311 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 FLYWCH2Q96CP2 140 aaKnown RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 ZNF385DQ9H6B1 395 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 KIAA1217Q5T5P2 1943 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 GNPNAT1Q96EK6 184 aaPredicted RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 AMMECR1Q9Y4X0 333 aaPredicted RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 IGHV3-72A0A0B4J1Y9 119 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 ICMTO60725 284 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 SLC25A45Q8N413 288 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 TMEM171Q8WVE6 324 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 OR2H1Q9GZK4 316 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 ACTL6AO96019 429 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 ACAA2P42765 397 aaKnown RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 SULT1A1P50225 295 aa10.71□□□□□ -0.69
SPG11-201ENST00000261866 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
SPG11-201ENST00000261866 LGALS7P47929 136 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 CAMPP49913 170 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 RSPO4Q2I0M5 234 aaPredicted RBP10.71□□□□□ -0.7
SPG11-201ENST00000261866 OR4F17Q8NGA8 305 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 DYNLRB2Q8TF09 96 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 HGDQ93099 445 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.7
SPG11-201ENST00000261866 NUBPLQ8TB37 319 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 ZNF721Q8TF20 911 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 ZNF764Q96H86 408 aaPredicted RBP10.71□□□□□ -0.7
SPG11-201ENST00000261866 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 DUSP21Q9H596 190 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 FOXS1O43638 330 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 RHBDL1O75783 438 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 HRASP01112 189 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 DHRS11Q6UWP2 260 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 TCEAL7Q9BRU2 100 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 RTN4RQ9BZR6 473 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 WDR13Q9H1Z4 485 aa10.71□□□□□ -0.7
SPG11-201ENST00000261866 MRM2Q9UI43 246 aaKnown RBP10.71□□□□□ -0.7
SPG11-201ENST00000261866 H7C2G1 150 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 FOXB2Q5VYV0 432 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
SPG11-201ENST00000261866 TRAV1-2A0A0B4J238 106 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 SOCS1O15524 211 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 ZFP36L2P47974 494 aaKnown RBP10.7□□□□□ -0.7
SPG11-201ENST00000261866 BTG1P62324 171 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 MRPS11P82912 194 aaKnown RBP10.7□□□□□ -0.7
SPG11-201ENST00000261866 PAX5Q02548 391 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 OR6X1Q8NH79 312 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 MS4A18H0YCH9 400 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 SULT1A2P50226 295 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 MS4A18Q3C1V0 323 aa10.7□□□□□ -0.7
SPG11-201ENST00000261866 ZDHHC11Q9H8X9 412 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms