RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FCARP24071 287 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 RAB32Q13637 225 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 OR2C3Q8N628 320 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 OR8B3Q8NGG8 313 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 OR8B2Q96RD0 313 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 UCN2Q96RP3 112 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 TTTY12Q9BZ98 90 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 MS4A5Q9H3V2 200 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 RP1L1Q8IWN7 2480 aaPredicted RBP16.69■□□□□ 0.26
PTPRE-201ENST00000254667 H0Y8G0 127 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 PTP4A3O75365 173 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 HAND1O96004 215 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 FGF5P12034 268 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 FFAR4Q5NUL3 377 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 ASB5Q8WWX0 329 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 GPR137Q96N19 417 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 ETV3LQ6ZN32 361 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 SPP1P10451 314 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 MRPS11P82912 194 aaKnown RBP16.69■□□□□ 0.26
PTPRE-201ENST00000254667 TMEM267Q0VDI3 215 aaPredicted RBP16.69■□□□□ 0.26
PTPRE-201ENST00000254667 FOXO1Q12778 655 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 GGTLC2Q14390 218 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 C10orf111Q8N326 155 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 OR5C1Q8NGR4 320 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 PHYHIPLQ96FC7 376 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 SAP30LQ9HAJ7 183 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 GPR27Q9NS67 375 aa16.69■□□□□ 0.26
PTPRE-201ENST00000254667 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 IGKV1-8A0A0C4DH67 115 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 MISP3Q96FF7 219 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 CHST5Q9GZS9 411 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 CPN1P15169 458 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 COX7A1P24310 79 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 ACSM6Q6P461 480 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 IGHV3-43A0A0B4J1X8 118 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 RNASEK-C17orf49H0YIS7 233 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 TO15178 435 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 IGHV3-43DP0DP04 118 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 AANATQ16613 207 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 SH2D7A6NKC9 451 aaPredicted RBP16.68■□□□□ 0.26
PTPRE-201ENST00000254667 STPG1Q5TH74 334 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 NUDT16L1Q9BRJ7 211 aaKnown RBP16.68■□□□□ 0.26
PTPRE-201ENST00000254667 MMP26Q9NRE1 261 aa16.68■□□□□ 0.26
PTPRE-201ENST00000254667 CD1AP06126 327 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 INHBBP09529 407 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 SLC6A1P30531 599 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF705AQ6ZN79 300 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-201ENST00000254667 LIAT1Q6ZQX7 453 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 GRAMD2BQ96HH9 432 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 ATAD5Q96QE3 1844 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 C16orf97H3BN30 126 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 BRS3P32247 399 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 FABP9Q0Z7S8 132 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 GUK1Q16774 197 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 BCL2L2Q92843 193 aaPredicted RBP16.67■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF586Q9NXT0 402 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 HMSDA8MTL9 139 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 IL24Q13007 206 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 PRR27Q6MZM9 219 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 GVQW1Q8N7I0 195 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 TGIF2Q9GZN2 237 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 DXOO77932 396 aaKnown RBP16.67■□□□□ 0.26
PTPRE-201ENST00000254667 OR1L4Q8NGR5 311 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF665Q9H7R5 613 aa16.67■□□□□ 0.26
PTPRE-201ENST00000254667 SEC14L6B5MCN3 397 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 RHOBP62745 196 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 MIDNQ504T8 468 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
PTPRE-201ENST00000254667 IGHV1-45A0A0A0MS14 117 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 CDIPTO14735 213 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 ANGPTL4Q9BY76 406 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 WDR61Q9GZS3 305 aaKnown RBP16.66■□□□□ 0.26
PTPRE-201ENST00000254667 PLSCR3Q9NRY6 295 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 TINAGQ9UJW2 476 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 IGKV1D-16P01601 117 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 FAM3AP98173 230 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 NTN1O95631 604 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 BCL3P20749 454 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 HLXQ14774 488 aaPredicted RBP16.66■□□□□ 0.26
PTPRE-201ENST00000254667 RNF2Q99496 336 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 TMPRSS2O15393 492 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 TSPAN2O60636 221 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 GOSR1O95249 250 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 FAM27BQ5VT28 67 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 MOGAT3Q86VF5 341 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 SIGLECL1Q8N7X8 197 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 ZBTB34Q8NCN2 500 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 OR10AC1Q8NH08 325 aa16.66■□□□□ 0.26
PTPRE-201ENST00000254667 GEMIN2O14893 280 aaKnown RBP16.65■□□□□ 0.26
PTPRE-201ENST00000254667 SOCS1O15524 211 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 ASAH2BP0C7U1 165 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 GABRA6Q16445 453 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF561Q8N587 486 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 DNASE2BQ8WZ79 361 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 FGF11Q92914 225 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 LPAR3Q9UBY5 353 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 ZNF320A2RRD8 509 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 ERVFC1-1P60608 527 aa16.65■□□□□ 0.26
PTPRE-201ENST00000254667 PCDHGA9Q9Y5G4 932 aaKnown RBP16.65■□□□□ 0.26
PTPRE-201ENST00000254667 A0A1W2PPQ1 181 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms