RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 OR51I2Q9H344 312 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 RIMS4Q9H426 269 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 J3QT63 122 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 PSMB6P28072 239 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 GLP1RP43220 463 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 ANKRD55Q3KP44 614 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 HAGHLQ6PII5 290 aaPredicted RBP19.57■□□□□ 0.72
HOXD9-201ENST00000249499 SCNM1Q9BWG6 230 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 IFT22Q9H7X7 185 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 C1orf123Q9NWV4 160 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 KIF25Q9UIL4 384 aa19.57■□□□□ 0.72
HOXD9-201ENST00000249499 TRBV6-7A0A0A0MS04 114 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 CRYM-AS1A6NIL9 109 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 NAPSAO96009 420 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 CELA3BP08861 270 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 FAM76BQ5HYJ3 339 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 VWA1Q6PCB0 445 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 ACOT7LQ6ZUV0 252 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 DYRK2Q92630 601 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 VRK1Q99986 396 aaPredicted RBP19.56■□□□□ 0.72
HOXD9-201ENST00000249499 CHMP1AQ9HD42 196 aaPredicted RBP19.56■□□□□ 0.72
HOXD9-201ENST00000249499 DKK4Q9UBT3 224 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 POM121CA8CG34 1229 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 EEF1E1-BLOC1S5C9J1V9 151 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 LILRA1O75019 489 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 ZNF728P0DKX0 622 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 IL32P24001 234 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 PTGER4P35408 488 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 P2RY6Q15077 328 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 BRICD5Q6PL45 260 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 MYPOPQ86VE0 399 aaPredicted RBP19.56■□□□□ 0.72
HOXD9-201ENST00000249499 Q8IYB0 196 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 SCARB1Q8WTV0 552 aa19.56■□□□□ 0.72
HOXD9-201ENST00000249499 LRP5LA4QPB2 252 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 IQCF6A8MYZ5 107 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 SYNGR1O43759 233 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 KNG1P01042 644 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 CA6P23280 308 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 RBMXP38159 391 aaKnown RBP19.55■□□□□ 0.72
HOXD9-201ENST00000249499 UCP2P55851 309 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 ESCO2Q56NI9 601 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 C1orf174Q8IYL3 243 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 WDR31Q8NA23 367 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 MOB3AQ96BX8 217 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 CITED4Q96RK1 184 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 PROCRQ9UNN8 238 aa19.55■□□□□ 0.72
HOXD9-201ENST00000249499 C13orf42A0A1B0GVH6 325 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 F8VVB4 439 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 F8VWA3 439 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 CRYABP02511 175 aaKnown RBP19.54■□□□□ 0.72
HOXD9-201ENST00000249499 UBA52P62987 128 aaKnown RBP19.54■□□□□ 0.72
HOXD9-201ENST00000249499 FAM58AQ8N1B3 248 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 FAM169BQ8N8A8 192 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 SNIP1Q8TAD8 396 aaKnown RBP19.54■□□□□ 0.72
HOXD9-201ENST00000249499 GALNT14Q96FL9 552 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 MARS2Q96GW9 593 aaKnown RBP19.54■□□□□ 0.72
HOXD9-201ENST00000249499 OR2J1Q9GZK6 312 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 OR51B6Q9H340 312 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 LIME1Q9H400 295 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 Q9N2K0 584 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 TRBV6-6A0A0A6YYG2 114 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 KLK10O43240 276 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 TNFSF13O75888 250 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 CGAP01215 116 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 PDCD1Q15116 288 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 ZNF585AQ6P3V2 769 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 SLC38A6Q8IZM9 456 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 C2orf50Q96LR7 162 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 WDR13Q9H1Z4 485 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 RDH8Q9NYR8 311 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 POLDIP2Q9Y2S7 368 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 KCNIP3Q9Y2W7 256 aa19.54■□□□□ 0.72
HOXD9-201ENST00000249499 DMXL2Q8TDJ6 3036 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 KIR2DS1A0A191URI9 304 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 FAM221AA4D161 298 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 LEUTXA8MZ59 168 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 PRKACAP17612 351 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 FCGR2CP31995 323 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 KIR2DS4P43632 304 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 RBM39Q14498 530 aaKnown RBP19.53■□□□□ 0.72
HOXD9-201ENST00000249499 KIR2DS1Q14954 304 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 LRRC37A5PQ49AS3 106 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 SPATA46Q5T0L3 261 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 Q6ZPA2 131 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 INO80EQ8NBZ0 244 aaPredicted RBP19.53■□□□□ 0.72
HOXD9-201ENST00000249499 SLC25A40Q8TBP6 338 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 SLX1AQ9BQ83 275 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 MEMO1Q9Y316 297 aa19.53■□□□□ 0.72
HOXD9-201ENST00000249499 KANTRA0A1W2PQU2 76 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 RNF222A6NCQ9 220 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 TMEM210A6NLX4 147 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 WDR1O75083 606 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 CTXN2P0C2S0 81 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 LYL1P12980 280 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 FOXF2Q12947 444 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 BEND4Q6ZU67 534 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 OR1J1Q8NGS3 322 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 STARD4Q96DR4 205 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 SYT3Q9BQG1 590 aa19.52■□□□□ 0.72
HOXD9-201ENST00000249499 METTL8Q9H825 291 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms