RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PIP4P2Q8N4L2 257 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 ZFP41Q8N8Y5 198 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 OR13C5Q8NGS8 318 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 TNFAIP8L1Q8WVP5 186 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 SSMEM1Q8WWF3 244 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 GPER1Q99527 375 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 PAK1IP1Q9NWT1 392 aaPredicted RBP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 IL36GQ9NZH8 169 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 GSTK1Q9Y2Q3 226 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 TRBV5-7A0A0A0MS05 114 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 A0A0U1RQK1 487 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 SH2D1BO14796 132 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 PSPNO60542 156 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 INMTO95050 263 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 ATP6V1G2O95670 118 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 OR2H2O95918 312 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 GABRR1P24046 479 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 LMO1P25800 156 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 ERP29P30040 261 aaKnown RBP10.45□□□□□ -0.74
VPREB3-201ENST00000248948 SAA4P35542 130 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF93P35789 620 aaPredicted RBP10.45□□□□□ -0.74
VPREB3-201ENST00000248948 OR3A1P47881 315 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 EDDM3BP56851 147 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 ERVFRD-1P60508 538 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 RPL15P61313 204 aaKnown RBP10.45□□□□□ -0.74
VPREB3-201ENST00000248948 KLRD1Q13241 179 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 GRK1Q15835 563 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 MIDNQ504T8 468 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 RNF144BQ7Z419 303 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 Q8NFD4 153 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 OR4M1Q8NGD0 313 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 OR52N4Q8NGI2 321 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 OR14A2Q96R54 314 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 FAM192AQ9GZU8 254 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 ZNRD1Q9P1U0 126 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
VPREB3-201ENST00000248948 SOX21Q9Y651 276 aaPredicted RBP10.45□□□□□ -0.74
VPREB3-201ENST00000248948 LINC00312Q9Y6C7 94 aa10.45□□□□□ -0.74
VPREB3-201ENST00000248948 FUOMA2VDF0 154 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 C17orf98A8MV24 154 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 HKR1P10072 659 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 CCL3L1P16619 93 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 CELP19835 753 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DUSP1P28562 367 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 OR3A4PP47883 348 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 SNU13P55769 128 aaKnown RBP10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DLX6P56179 175 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 P2RX3P56373 397 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DOC2BQ14184 412 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 EDDM3AQ14507 147 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 IL13RA2Q14627 380 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 IRF3Q14653 427 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 SPHARQ15513 63 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 NHLRC3Q5JS37 347 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 HCP5Q6MZN7 132 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 ASCL4Q6XD76 172 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 TCF23Q7RTU1 214 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 PDZD9Q8IXQ8 264 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 C11orf42Q8N5U0 333 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 NKAIN3Q8N8D7 197 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 OR4S1Q8NGB4 309 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 OR51T1Q8NGJ9 327 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 GCDHQ92947 438 aaPredicted RBP10.44□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF714Q96N38 554 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DERL3Q96Q80 235 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 CHST6Q9GZX3 395 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 DUSP21Q9H596 190 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 HEXA-AS1Q9H8Q6 139 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 BLOC1S6Q9UL45 172 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 RAB26Q9ULW5 256 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 FOXJ3Q9UPW0 622 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 SF3B6Q9Y3B4 125 aaKnown RBP10.44□□□□□ -0.74
VPREB3-201ENST00000248948 FAM96BQ9Y3D0 163 aa10.44□□□□□ -0.74
VPREB3-201ENST00000248948 PNMA8CA0A1B0GUJ8 204 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 PTGES3LE9PB15 166 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 SIRPB1O00241 398 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 SLC33A1O00400 549 aaPredicted RBP10.43□□□□□ -0.74
VPREB3-201ENST00000248948 RGS10O43665 173 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF780AO75290 641 aaPredicted RBP10.43□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF728P0DKX0 622 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF44P15621 663 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 CRHBPP24387 322 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 VHLP40337 213 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 PTGFRP43088 359 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 DLX1P56177 255 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 PAX5Q02548 391 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 FOXL1Q12952 345 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 RSU1Q15404 277 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 C12orf54Q6X4T0 127 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 LINC00596Q86U02 117 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 SATL1Q86VE3 508 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 CDH26Q8IXH8 852 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 MS4A15Q8N5U1 240 aa10.43□□□□□ -0.74
VPREB3-201ENST00000248948 ZNF184Q99676 751 aaPredicted RBP10.43□□□□□ -0.74
VPREB3-201ENST00000248948 UBE2J1Q9Y385 318 aaPredicted RBP10.43□□□□□ -0.74
VPREB3-201ENST00000248948 TRAV8-7A0A075B6U6 113 aa10.42□□□□□ -0.74
VPREB3-201ENST00000248948 MEIOCA2RUB1 952 aa10.42□□□□□ -0.74
VPREB3-201ENST00000248948 BTBD17A6NE02 478 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms