RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LINC00271P0C7V0 271 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 TNFRSF1AP19438 455 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 HNF1AP20823 631 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 CDAP32320 146 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 FMODQ06828 376 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 FBXW12Q6X9E4 464 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 SNX22Q96L94 193 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 CHST5Q9GZS9 411 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 WDR13Q9H1Z4 485 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 BANF2Q9H503 90 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 FBXL17Q9UF56 701 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 ZNF107Q9UII5 783 aaPredicted RBP9.69□□□□□ -0.86
COPA-201ENST00000241704 CENPVL1A0A0U1RR11 272 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 ACAA2P42765 397 aaKnown RBP9.69□□□□□ -0.86
COPA-201ENST00000241704 ZNF121P58317 390 aaPredicted RBP9.69□□□□□ -0.86
COPA-201ENST00000241704 ARF1P84077 181 aaKnown RBP9.69□□□□□ -0.86
COPA-201ENST00000241704 ZNF92Q03936 586 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 SEH1LQ96EE3 360 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 ATG101Q9BSB4 218 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 A0A1B0GWJ7 208 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 CBY3A6NI87 242 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 SOX15O60248 233 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
COPA-201ENST00000241704 PCK2Q16822 640 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 TMEM41BQ5BJD5 291 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 SPATA46Q5T0L3 261 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 GPR157Q5UAW9 335 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 C1QL3Q5VWW1 255 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 ZNF573Q86YE8 665 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 OR51A2Q8NGJ7 313 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 RNF128Q8TEB7 428 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 FRZBQ92765 325 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 FAM234AQ9H0X4 552 aa9.69□□□□□ -0.86
COPA-201ENST00000241704 A0A1W2PR80 420 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 E5RGE8 158 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 CLDN34H7C241 214 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NKX2-8O15522 239 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 OR13C8Q8NGS7 320 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 OR51F2Q8NH61 342 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
COPA-201ENST00000241704 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NSG2Q9Y328 171 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 ARID1AO14497 2285 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 RAB11AP62491 216 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 FUT5Q11128 374 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 SLC35G3Q8N808 338 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 MISP3Q96FF7 219 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 C4orf45Q96LM5 186 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 AK3Q9UIJ7 227 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 VSIG4Q9Y279 399 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 HS3ST1O14792 307 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
COPA-201ENST00000241704 SFT2D2O95562 160 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 MT-CO2P00403 227 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NRASP01111 189 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 IGKV1D-16P01601 117 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 CTLA4P16410 223 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NUTF2P61970 127 aaKnown RBP9.68□□□□□ -0.86
COPA-201ENST00000241704 LY6G6FQ5SQ64 297 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 ZNF468Q5VIY5 522 aaPredicted RBP9.68□□□□□ -0.86
COPA-201ENST00000241704 UNQ9370/PRO34162Q6UXP9 181 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 TMEM104Q8NE00 496 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 OR10AD1Q8NGE0 317 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 OR13D1Q8NGV5 346 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 NMNAT2Q9BZQ4 307 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 SLC25A31Q9H0C2 315 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 CDRT15L2A8MXV6 281 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 LYZL6O75951 148 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 TRGC2P03986 189 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 PI3P19957 117 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 ZBTB25P24278 435 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 MAGEA5P43359 124 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
COPA-201ENST00000241704 NPEPL1Q8NDH3 523 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
COPA-201ENST00000241704 CCL21O00585 134 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 SPRY3O43610 288 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 GNG10P50151 68 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 WDR38Q5JTN6 314 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 RDH5Q92781 318 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 APOBEC3DQ96AK3 386 aaPredicted RBP9.67□□□□□ -0.86
COPA-201ENST00000241704 SPACA5Q96QH8 159 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 MYOZ1Q9NP98 299 aaPredicted RBP9.67□□□□□ -0.86
COPA-201ENST00000241704 C20orf202A1L168 122 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 ALOX5APP20292 161 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 EFNB2P52799 333 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 KCNIP4Q6PIL6 250 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 THNSL2Q86YJ6 484 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 PRSS35Q8N3Z0 413 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 H3BQ15 152 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 PIN1P1O15428 100 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 REEP6Q96HR9 211 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 NYNRINQ9P2P1 1898 aaKnown RBP9.67□□□□□ -0.86
COPA-201ENST00000241704 WSB1Q9Y6I7 421 aa9.67□□□□□ -0.86
COPA-201ENST00000241704 GCGP01275 180 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms