RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ECDO95905 644 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 GNB3P16520 340 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 TNFSF8P32971 234 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 C6orf183Q5T699 404 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 C11orf88Q6PI97 169 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A1Q86YD7 464 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 DRAXINQ8NBI3 349 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM221AA4D161 298 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 SRRM5B3KS81 715 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 NDUFS7O75251 213 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 GLAP06280 429 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ADH4P08319 380 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 NFYBP25208 207 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 GATA4P43694 442 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 HERV-K104P61576 105 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF45Q02386 682 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 TNK1Q13470 666 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM104Q8NE00 496 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 PLEKHF2Q9H8W4 249 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 MEIS3P1A6NDR6 274 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR2H2O95918 312 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 LGALS4P56470 323 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 DCDC5Q6ZRR9 648 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 C6orf201Q7Z4U5 140 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 SNX22Q96L94 193 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAAP24Q9BTP7 215 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 LIME1Q9H400 295 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 A3GALT2U3KPV4 340 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 FOXH1O75593 365 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 DIRAS3O95661 229 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ELK1P19419 428 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 CEBPDP49716 269 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q8N402 240 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF561Q8N587 486 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 CAPSLQ8WWF8 208 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR6C3Q9NZP0 311 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 KIR2DS1A0A191URI9 304 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 MGST3O14880 152 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 SLC25A16P16260 332 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 ANOS1P23352 680 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 KIR2DS4P43632 304 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 KCNJ3P48549 501 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 RPL31P62899 125 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 KIR2DS1Q14954 304 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 SHEQ5VZ18 495 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR5H2Q8NGV7 314 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 NRIP2Q9BQI9 281 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 TAS2R8Q9NYW2 309 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 IGKV1-27A0A075B6S5 117 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 J3QRK9 145 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 TOR1AO14656 332 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 PSG2P11465 335 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR4K15Q8NH41 348 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 C12orf4Q9NQ89 552 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 GCSAMQ8N6F7 178 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 PTX4Q96A99 478 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 SEH1LQ96EE3 360 aa9.37□□□□□ -0.91
TNFAIP3-201ENST00000237289 MEX3AA1L020 520 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM172BPA6NC97 362 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A10PA6NDY2 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A18PA6NE21 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A16PA6NEW6 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A20PA6NIJ5 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A8PA6NJQ4 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A7PA6NKC0 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A22PA8MWA6 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A12PA8MX19 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A5PA8MXJ8 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A23PA8MXZ1 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 XRCC3O43542 346 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A15PP0C7V4 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A13PP0C7W8 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A14PP0C7W9 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 FAM90A24PP0C7X0 464 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 NR4A2P43354 598 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 TAS2R20P59543 309 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 MST1LQ2TV78 715 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 RNASE10Q5GAN6 216 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 GAL3ST2Q9H3Q3 398 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 IL36GQ9NZH8 169 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 NAV2Q8IVL1 2488 aa9.36□□□□□ -0.91
TNFAIP3-201ENST00000237289 SHISA3A0PJX4 238 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms