RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 VAX1Q5SQQ9 334 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 SPACA9Q96E40 222 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 POLEQ07864 2286 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 SPRY1O43609 319 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 PTP4A3O75365 173 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 B4GALNT1Q00973 533 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ALG1L2C9J202 215 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 SLC25A5P05141 298 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 MUC1P15941 1255 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 MRPL58Q14197 206 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 ZNF77Q15935 545 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 GUCA2BQ16661 112 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 OR1L6Q8NGR2 347 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 A0A1B0GV72 72 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 RPL7P18124 248 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 SUCLG1P53597 346 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 FGF8P55075 233 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 CDKN3Q16667 212 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ZNF766Q5HY98 468 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 VN1R2Q8NFZ6 395 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 DCAF16Q9NXF7 216 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 INTS1Q8N201 2190 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 TMEM238LA0A1B0GVL6 79 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 A6NJY4 79 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 TRDCB7Z8K6 153 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 B4GALT1P15291 398 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 CEACAM6P40199 344 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 OR10V1Q8NGI7 309 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 PECRQ9BY49 303 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ZBP1Q9H171 429 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 SMPD2O60906 423 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 NEURL1O76050 574 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 H1FXQ92522 213 aaKnown RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 TSPAN32Q96QS1 320 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 CA11O75493 328 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 OR2T8A6NH00 312 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 RHBDL1O75783 438 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 EIF3GO75821 320 aaKnown RBP eCLIP7.3□□□□□ -1.24
APOB-201ENST00000233242 CXCL12P48061 93 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 ERRFI1Q9UJM3 462 aaPredicted RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 FFAR1O14842 300 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 PLPPR5Q32ZL2 321 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 SCCPDHQ8NBX0 429 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 DTD1Q8TEA8 209 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 GNB4Q9HAV0 340 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 SLC7A10Q9NS82 523 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 SLC22A20A6NK97 555 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 OR1P1Q8NH06 330 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 SMIM12Q96EX1 92 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 P2RX4Q99571 388 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 KIAA1217Q5T5P2 1943 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 A0A1W2PN81 502 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 CYB561D1Q8N8Q1 229 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 DOT1LQ8TEK3 1739 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 WDFY1Q8IWB7 410 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 OR2V2Q96R30 315 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 LILRA5A6NI73 299 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 MYBPHQ13203 477 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 TMEM38BQ9NVV0 291 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 GCSHP23434 173 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 PLP1P60201 277 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 TMEM211Q6ICI0 200 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 COL22A1Q8NFW1 1626 aaPredicted RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 FOXF1Q12946 379 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 MRPL30Q8TCC3 161 aaKnown RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 CA10Q9NS85 328 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 SPTAN1Q13813 2472 aaKnown RBP7.3□□□□□ -1.24
APOB-201ENST00000233242 RSG1Q9BU20 258 aa7.3□□□□□ -1.24
APOB-201ENST00000233242 ZBTB34Q8NCN2 500 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 OR4D9Q8NGE8 314 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 LANCL1O43813 399 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 CCR5P51681 352 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 DSCR4P56555 118 aaPredicted RBP7.29□□□□□ -1.24
APOB-201ENST00000233242 LINC00596Q86U02 117 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 PDPNQ86YL7 162 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 OR4S2Q8NH73 311 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 OR1L3Q8NH93 324 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 VN1R17PQ8TDU5 208 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 ATG2BQ96BY7 2078 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 MED12Q93074 2177 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 A0A1W2PNR3 127 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 HELTA6NFD8 242 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 CD226Q15762 336 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 VHLLQ6RSH7 139 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 NPIPB9F8W1W9 429 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 UBE2L3P68036 154 aaKnown RBP7.29□□□□□ -1.24
APOB-201ENST00000233242 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
APOB-201ENST00000233242 ZNF547Q8IVP9 402 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 CTSVO60911 334 aa7.29□□□□□ -1.24
APOB-201ENST00000233242 TMEM215Q68D42 235 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms