RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 PRKACAP17612 351 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 COX5AP20674 150 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 GNG3P63215 75 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 WDR86Q86TI4 376 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM219AQ8IW50 185 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 OR6K3Q8NGY3 331 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 PRRX2Q99811 253 aa12.32□□□□□ -0.44
PRKAB1-201ENST00000229328 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 TNFSF13O75888 250 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 CRHP06850 196 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 CTSDP07339 412 aaPredicted RBP12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FCGR2CP31995 323 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FXYD4P59646 89 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 IGSF11Q5DX21 431 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 INO80CQ6PI98 192 aaPredicted RBP12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF610Q8N9Z0 462 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 OR10C1Q96KK4 312 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 OPN3Q9H1Y3 402 aaPredicted RBP12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 OR51I2Q9H344 312 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 RAB18Q9NP72 206 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 RCC2Q9P258 522 aaKnown RBP12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 MBD2Q9UBB5 411 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 CACNA1GO43497 2377 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 BSNQ9UPA5 3926 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 A0A0B4J2A0 478 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A10PA6NDY2 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A18PA6NE21 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A16PA6NEW6 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A20PA6NIJ5 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A8PA6NJQ4 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A7PA6NKC0 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 OR5B21A6NL26 309 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A22PA8MWA6 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A12PA8MX19 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A5PA8MXJ8 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A23PA8MXZ1 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 AHRRA9YTQ3 701 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 SHOXO15266 292 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A15PP0C7V4 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A13PP0C7W8 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A14PP0C7W9 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 FAM90A24PP0C7X0 464 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 PMELP40967 661 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF573Q86YE8 665 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 GSX2Q9BZM3 304 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 CHMP1AQ9HD42 196 aaPredicted RBP12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 SHPKQ9UHJ6 478 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 SHANK1Q9Y566 2161 aa12.31□□□□□ -0.44
PRKAB1-201ENST00000229328 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 PSMB6P28072 239 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 ECI1P42126 302 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 UCP2P55851 309 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 MRPL49Q13405 166 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 Q6ZS92 163 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 OR1J1Q8NGS3 322 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 STARD4Q96DR4 205 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 NMES1Q9C002 83 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 H0YIZ8 118 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 SPDEFO95238 335 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 CNOT4O95628 575 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 IFNA2P01563 188 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 HOXB5P09067 269 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 ZNF728P0DKX0 622 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 RBMXL3Q8N7X1 1067 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 RNF126Q9BV68 326 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 METTL8Q9H825 291 aaKnown RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 DMXL2Q8TDJ6 3036 aa12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
PRKAB1-201ENST00000229328 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 WDR1O75083 606 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 NAPSAO96009 420 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 IGKV3-15P01624 115 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 CBR1P16152 277 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 MPV17P39210 176 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 PIGPP57054 158 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 IL24Q13007 206 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 PSG7Q13046 419 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 MPV17LQ2QL34 196 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 OR2A2Q6IF42 318 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 RPRMLQ8N4K4 120 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 THAP6Q8TBB0 222 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 ATMQ13315 3056 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 TEX13DA0A0J9YY54 714 aaPredicted RBP12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 J3QW42 95 aa12.29□□□□□ -0.44
PRKAB1-201ENST00000229328 B3GALNT1O75752 331 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms