RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 C1QBP02746 253 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 CXCL3P19876 107 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 FABP6P51161 128 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 IGFBP7Q16270 282 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 OR52B4Q8NGK2 314 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 TERB2Q8NHR7 220 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 RND1Q92730 232 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 TRAF4Q9BUZ4 470 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-201ENST00000225726 CXXC4Q9H2H0 198 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 PPA2Q9H2U2 334 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 C16orf97H3BN30 126 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 RHBDL1O75783 438 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 GLAP06280 429 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 FAM122CQ6P4D5 195 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 TMED4Q7Z7H5 227 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF488Q96MN9 340 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 EHFQ9NZC4 300 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 FZR1Q9UM11 496 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 BOD1L1Q8NFC6 3051 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 MLNRO43193 412 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 OR4E1P0C645 316 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 TSPAN5P62079 268 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF431Q8TF32 576 aaPredicted RBP12.66□□□□□ -0.38
CCDC47-201ENST00000225726 DYRK2Q92630 601 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 PRORYQ9H606 182 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 IL36RNQ9UBH0 155 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 CASP6P55212 293 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF154Q13106 437 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 IKZF1Q13422 519 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 OVCH2Q7RTZ1 564 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 SPACA1Q9HBV2 294 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 ANXA10Q9UJ72 324 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 NPTNQ9Y639 398 aa12.66□□□□□ -0.38
CCDC47-201ENST00000225726 IGKV1D-8A0A087WSZ0 117 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 GRK1Q15835 563 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 OR13G1Q8NGZ3 307 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 MS4A7Q9GZW8 240 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ZGRF1Q86YA3 2104 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 CEACAM18A8MTB9 384 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 RD3LP0DJH9 198 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 Q6ZR03 302 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 LHFPL1Q86WI0 220 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF436Q9C0F3 470 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 MEMO1Q9Y316 297 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ESPL1Q14674 2120 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 GLRXP35754 106 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 FAHD2BQ6P2I3 314 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-201ENST00000225726 FAHD2AQ96GK7 314 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 OSGIN2Q9Y236 505 aa12.65□□□□□ -0.38
CCDC47-201ENST00000225726 RGS13O14921 159 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 RPS23P62266 143 aaKnown RBP12.64□□□□□ -0.39
CCDC47-201ENST00000225726 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 TLNRD1Q9H1K6 362 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 FN3KRPQ9HA64 309 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 SPTBN4Q9H254 2564 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 TRGV8A0A0C4DH27 118 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
CCDC47-201ENST00000225726 SIGLEC5O15389 551 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 GRPP07492 148 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 FOSL1P15407 271 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 FPR2P25090 351 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 NRIP2Q9BQI9 281 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 NECAP2Q9NVZ3 263 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 MCRIP1C9JLW8 97 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 CDIPTO14735 213 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 SFTPCP11686 197 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
CCDC47-201ENST00000225726 GZMKP49863 264 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 TAS2R31P59538 309 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 TAGLNQ01995 201 aaKnown RBP12.64□□□□□ -0.39
CCDC47-201ENST00000225726 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
CCDC47-201ENST00000225726 ATMQ13315 3056 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 FABP7O15540 132 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
CCDC47-201ENST00000225726 CD40P25942 277 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 CA7P43166 264 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC47-201ENST00000225726 C22orf34Q6ZV56 151 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 POC1AQ8NBT0 407 aa12.63□□□□□ -0.39
CCDC47-201ENST00000225726 FAM221AA4D161 298 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms