RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 GLIPR1L1Q6UWM5 242 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 PNLDC1Q8NA58 520 aaKnown RBP11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 SNX22Q96L94 193 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 RHOFQ9HBH0 211 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 IL36GQ9NZH8 169 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 AK6Q9Y3D8 172 aaKnown RBP11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 ZFHX3Q15911 3703 aa11.87□□□□□ -0.51
SUPT4H1-201ENST00000225504 A0A087WXM4 84 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 DEGS1O15121 323 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 LIPFP07098 398 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 MMP9P14780 707 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 SRD5A1P18405 259 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 HNF1AP20823 631 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 GABRR1P24046 479 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 LMO1P25800 156 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 OR3A1P47881 315 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 PRB3Q04118 309 aaPredicted RBP11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 C11orf91Q3C1V1 193 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 C1orf100Q5SVJ3 147 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 C22orf42Q6IC83 251 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 OR51T1Q8NGJ9 327 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 POM121Q96HA1 1249 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 TBX15Q96SF7 602 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 BANF2Q9H503 90 aa11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 EXOSC4Q9NPD3 245 aaKnown RBP11.86□□□□□ -0.51
SUPT4H1-201ENST00000225504 TRIM64CA6NLI5 447 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 SLC33A1O00400 549 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 ARL6IP5O75915 188 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 TOX4O94842 621 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 ZNF44P15621 663 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 GRK1Q15835 563 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 AWAT2Q6E213 333 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 FAM185AQ8N0U4 392 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 OR8H2Q8N162 312 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 OSR2Q8N2R0 312 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 Q8N7P7 452 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 NKAIN3Q8N8D7 197 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 TMEM104Q8NE00 496 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 NANPQ8TBE9 248 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 SLC25A28Q96A46 364 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 UPRTQ96BW1 309 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 WDFY2Q96P53 400 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 S100A13Q99584 98 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 UQCC2Q9BRT2 126 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 FAM234AQ9H0X4 552 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 SLITRK2Q9H156 845 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 KCNK15Q9H427 330 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 GLS2Q9UI32 602 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
SUPT4H1-201ENST00000225504 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 CSTBP04080 98 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 GADD45AP24522 165 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 EDDM3BP56851 147 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 RBM11P57052 281 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 EDDM3AQ14507 147 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 GLT8D1Q68CQ7 371 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 C11orf42Q8N5U0 333 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 TBC1D15Q8TC07 691 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 C22orf15Q8WYQ4 148 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 PPA2Q9H2U2 334 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 RNF167Q9H6Y7 350 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 TXNL4BQ9NX01 149 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 ING3Q9NXR8 418 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 NAV3Q8IVL0 2385 aa11.84□□□□□ -0.51
SUPT4H1-201ENST00000225504 A0A1W2PQ09 198 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 HSPB6O14558 160 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 SMIM18P0DKX4 95 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 CCL3L1P16619 93 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 CD36P16671 472 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 BMXP51813 675 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 OR10A3P58181 314 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 AESQ08117 197 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 ZNF273Q14593 569 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 P2RY14Q15391 338 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 TAF9Q16594 264 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 GDPD3Q7L5L3 318 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 NR2C2APQ86WQ0 139 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 BPIFB2Q8N4F0 458 aa11.83□□□□□ -0.52
SUPT4H1-201ENST00000225504 OR5D13Q8NGL4 314 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms