RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FIP1L1Q6UN15 594 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 FAM89BQ8N5H3 189 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 ZIC4Q8N9L1 334 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 AQP10Q96PS8 301 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 LRP4O75096 1905 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 CD300LBA8K4G0 201 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 C10orf142B7Z368 130 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF239Q16600 458 aaKnown RBP12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 BEND4Q6ZU67 534 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 SUMF2Q8NBJ7 301 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 POC1AQ8NBT0 407 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 NINJ1Q92982 152 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 WNT5BQ9H1J7 359 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 ETV2O00321 342 aaPredicted RBP12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 PPYP01298 95 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 HNF4GQ14541 408 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 NABP1Q96AH0 204 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 TM2D1Q9BX74 207 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 TLNRD1Q9H1K6 362 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 R4GN57 208 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 LY6G6EA0A0G2JKS1 128 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 H3BP45 60 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 BCL3P20749 454 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 CTSSP25774 331 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 FAM3AP98173 230 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 TGFBR3Q03167 851 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 SLC10A1Q14973 349 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 TECTBQ96PL2 329 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ZPBPQ9BS86 351 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 HES7Q9BYE0 225 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 SMCO4Q9NRQ5 59 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 STARD10Q9Y365 291 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 KPTNQ9Y664 436 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 U3KQA8 63 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 XIRP2A4UGR9 3374 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 C3orf85A0A1B0GTC6 90 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 FAM24AA6NFZ4 105 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 SYNGR3O43761 229 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 GPR137BO60478 399 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF708P17019 499 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 IDH3GP51553 393 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 STK11Q15831 433 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 IGSF11Q5DX21 431 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 C1orf147Q96MC9 270 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 TMED3Q9Y3Q3 217 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 CRYM-AS1A6NIL9 109 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 DEGS1O15121 323 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ACTL6AO96019 429 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 NAT1P18440 290 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 CHATP28329 748 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ARR3P36575 388 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ID4P47928 161 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 RPL23AP62750 156 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 OR2T2Q6IF00 324 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF529Q6P280 563 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 MRGPRFQ96AM1 343 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 FER1L6-AS2Q96M78 137 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 GPHA2Q96T91 129 aa12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 TPRP12270 2363 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-201ENST00000222402 NXPH2O95156 264 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 HKR1P10072 659 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 ANOS1P23352 680 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 NPBWR2P48146 333 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 POLR2GP62487 172 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 ZFP62Q8NB50 900 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 GLYATL2Q8WU03 294 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 ARGFXA6NJG6 315 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 GRPP07492 148 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 TSC22D1Q15714 1073 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 OBP2BQ9NPH6 170 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 A0A1W2PR80 420 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 B4E171 279 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 SIRPB1O00241 398 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 TSPAN7P41732 249 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 OR2M7Q8NG81 312 aa12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 KLF13Q9Y2Y9 288 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-201ENST00000222402 CACNA1GO43497 2377 aa12.96□□□□□ -0.34
UBE2D4-201ENST00000222402 TNFSF15O95150 251 aa12.96□□□□□ -0.34
UBE2D4-201ENST00000222402 LPAR6P43657 344 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms