RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 FAM87AP0C7U9 286 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 NPY1RP25929 384 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 DCTDP32321 178 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 SLC37A1P57057 533 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 P2RY6Q15077 328 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 EID2BQ96D98 161 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 PERPQ96FX8 193 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 DERL3Q96Q80 235 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 J3QT63 122 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 HERVK_113P61574 105 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 RSPO4Q2I0M5 234 aaPredicted RBP9.32□□□□□ -0.92
TRPS1-201ENST00000220888 FDX2Q6P4F2 183 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 VN1R4Q7Z5H5 301 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 GPR137Q96N19 417 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 MSL2Q9HCI7 577 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
TRPS1-201ENST00000220888 SSC5DA1L4H1 1573 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 IGHV3OR15-7A0A075B7D8 119 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SNRPGP15A8MWD9 76 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 GGNBP1Q5YKI7 109 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 DDA1Q9BW61 102 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 FAM53CQ9NYF3 392 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 TBX19O60806 448 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SELENOPP49908 381 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 LSM6P62312 80 aaKnown RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ZNF547Q8IVP9 402 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 KLHDC1Q8N7A1 406 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 COX14Q96I36 57 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ICE1Q9Y2F5 2266 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 A0A1W2PS18 150 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 PDZK1IP1Q13113 114 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 LIAT1Q6ZQX7 453 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 NTNG2Q96CW9 530 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 TMPRSS13Q9BYE2 586 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 GPR27Q9NS67 375 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 IGLV3-16A0A075B6K0 115 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 LIPT2A6NK58 231 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SS18L1O75177 396 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 JUNBP17275 347 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SPINK2P20155 84 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 CBLN3Q6UW01 205 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 ASB10Q8WXI3 467 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 OR2H1Q9GZK4 316 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 OPN3Q9H1Y3 402 aaPredicted RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 AUNIPQ9H7T9 357 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 SLC17A5Q9NRA2 495 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 TECRQ9NZ01 308 aaKnown RBP9.31□□□□□ -0.92
TRPS1-201ENST00000220888 FLVCR2Q9UPI3 526 aa9.31□□□□□ -0.92
TRPS1-201ENST00000220888 UBE2L6O14933 153 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 LIFP15018 202 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 UQCRFS1P47985 274 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 GP2P55259 537 aaKnown RBP9.3□□□□□ -0.92
TRPS1-201ENST00000220888 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 PPP1R1CQ8WVI7 109 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 STARD4Q96DR4 205 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 ZNF275Q9NSD4 429 aaPredicted RBP9.3□□□□□ -0.92
TRPS1-201ENST00000220888 WASHC3Q9Y3C0 194 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 HILPDAQ9Y5L2 63 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 CD96P40200 585 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 PRSS12P56730 875 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 COL13A1Q5TAT6 717 aaPredicted RBP9.3□□□□□ -0.92
TRPS1-201ENST00000220888 AMMECR1LQ6DCA0 310 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 MDP1Q86V88 176 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 TMEM18Q96B42 140 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 RNF115Q9Y4L5 304 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 SLX4Q8IY92 1834 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 USF1P22415 310 aaPredicted RBP9.3□□□□□ -0.92
TRPS1-201ENST00000220888 CTSSP25774 331 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 SPRED3Q2MJR0 410 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 GTF2H5Q6ZYL4 71 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 ADAMTS17Q8TE56 1095 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 TMEM167BQ9NRX6 74 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 IL20Q9NYY1 176 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 TOGARAM1Q9Y4F4 1720 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 PRR33A8MZF0 331 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 IFNL4K9M1U5 179 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 APELAP0DMC3 54 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 CPN1P15169 458 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 PMCHP20382 165 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 PMELP40967 661 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 ASAH1Q13510 395 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 RNF167Q9H6Y7 350 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 MYH8P13535 1937 aa9.3□□□□□ -0.92
TRPS1-201ENST00000220888 TRDCB7Z8K6 153 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms