RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ACTG1P63261 375 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 C11orf71Q6IPW1 123 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 DTX2Q86UW9 622 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 FAM90A1Q86YD7 464 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 TAS2R8Q9NYW2 309 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
SNRPD3-201ENST00000215829 DYSFO75923 2080 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 ANKRD20A5PA0PJZ0 165 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 CLDN1O95832 211 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 GLAP06280 429 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 IRF2P14316 349 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 ZNF44P15621 663 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 AP3S2P59780 193 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 DCDC5Q6ZRR9 648 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 HPS1Q92902 700 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 VRK1Q99986 396 aaPredicted RBP13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 OCSTAMPQ9BR26 566 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 TREM2Q9NZC2 230 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 AK3Q9UIJ7 227 aa13.41□□□□□ -0.26
SNRPD3-201ENST00000215829 TRAV24A0A0B4J272 114 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 LRRC30A6NM36 301 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 MCRIP1C9JLW8 97 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 OR2H2O95918 312 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 HAND1O96004 215 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 CSF1P09603 554 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 CBX5P45973 191 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 DYRK1AQ13627 763 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 BOLLQ8N9W6 283 aaKnown RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 SUMF2Q8NBJ7 301 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 TRAF4Q9BUZ4 470 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 C11orf54Q9H0W9 315 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 OR14J1Q9UGF5 321 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 UBE2QL1A1L167 161 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 VGLL3A8MV65 326 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 LYRM1O43325 122 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 CYB5R3P00387 301 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 LMO1P25800 156 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 TGIF2LYQ8IUE0 185 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 CMSS1Q9BQ75 279 aaKnown RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 DPCDQ9BVM2 203 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 SEBOXQ9HB31 216 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 DNAJB11Q9UBS4 358 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 ZNF107Q9UII5 783 aaPredicted RBP13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 CACNG2Q9Y698 323 aa13.4□□□□□ -0.26
SNRPD3-201ENST00000215829 HRNRQ86YZ3 2850 aaPredicted RBP13.4□□□□□ -0.27
SNRPD3-201ENST00000215829 COL12A1Q99715 3063 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 IFNL4K9M1U5 179 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 PTTG1O95997 202 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 HPXP02790 462 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 RCVRNP35243 200 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 MRPS15P82914 257 aaKnown RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 SP5Q6BEB4 398 aaPredicted RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 BPIFB2Q8N4F0 458 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 GVQW1Q8N7I0 195 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 CHPT1Q8WUD6 406 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 DEDD2Q8WXF8 326 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 RDH5Q92781 318 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 C7orf50Q9BRJ6 194 aaKnown RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 RAB1BQ9H0U4 201 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 IFT46Q9NQC8 304 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 ANAPC10Q9UM13 185 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 LAMP3Q9UQV4 416 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 WIPI2Q9Y4P8 454 aa13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
SNRPD3-201ENST00000215829 SPTAN1Q13813 2472 aaKnown RBP13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 OR2AT4A6NND4 320 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 CENPXA8MT69 81 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 SIRPB1O00241 398 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 FCER2P06734 321 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 PSG2P11465 335 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 CEBPDP49716 269 aaPredicted RBP13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 TLE4Q04727 773 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 OXA1LQ15070 435 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 MZT2BQ6NZ67 158 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 GDPD3Q7L5L3 318 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 C1orf87Q8N0U7 546 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 CCL17Q92583 94 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 DYRK2Q92630 601 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 HDHD3Q9BSH5 251 aaPredicted RBP13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 TMEM106BQ9NUM4 274 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 DCAF16Q9NXF7 216 aa13.38□□□□□ -0.27
SNRPD3-201ENST00000215829 IGHV1-69-2A0A0G2JMI3 117 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 A1L4Q6 167 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 TMEM178BH3BS89 294 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 HSPB6O14558 160 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 NAT1P18440 290 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 DTYMKP23919 212 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 PRDX2P32119 198 aa13.37□□□□□ -0.27
SNRPD3-201ENST00000215829 CD80P33681 288 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms