RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 OR4C45A6NMZ5 311 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 C21orf140B9A014 251 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 TCAPO15273 167 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 DNPH1O43598 174 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 P2RY1P47900 373 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 C1QL3Q5VWW1 255 aa11.98□□□□□ -0.49
SF3A1-201ENST00000215793 HSD17B13Q7Z5P4 300 aaPredicted RBP11.98□□□□□ -0.49
SF3A1-201ENST00000215793 HSD17B10Q99714 261 aaKnown RBP11.98□□□□□ -0.49
SF3A1-201ENST00000215793 IGHV3-43A0A0B4J1X8 118 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 CYR61O00622 381 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 IGHV3-43DP0DP04 118 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 ZXDAP98168 799 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 ZNF260Q3ZCT1 412 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 BTNL3Q6UXE8 466 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
SF3A1-201ENST00000215793 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
SF3A1-201ENST00000215793 GZMHP20718 246 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 CCKARP32238 428 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 POLR2GP62487 172 aaKnown RBP eCLIP11.97□□□□□ -0.49
SF3A1-201ENST00000215793 WDR73Q6P4I2 378 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 TOMM20LQ6UXN7 152 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 NHSQ6T4R5 1651 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 CA11O75493 328 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 ADAP1O75689 374 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 RPS4Y1P22090 263 aaKnown RBP11.97□□□□□ -0.49
SF3A1-201ENST00000215793 HLA-DRB3P79483 266 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 SLC25A22Q9H936 323 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 CRHP06850 196 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 SPINK14Q6IE38 97 aa11.97□□□□□ -0.49
SF3A1-201ENST00000215793 OOEPA6NGQ2 149 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 FCN1O00602 326 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 CRYBA1P05813 215 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 CD3EP07766 207 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 SP1P08047 785 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 COX7A1P24310 79 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 TIAL1Q01085 375 aaKnown RBP eCLIP11.96□□□□□ -0.49
SF3A1-201ENST00000215793 INPP5JQ15735 1006 aaPredicted RBP11.96□□□□□ -0.49
SF3A1-201ENST00000215793 CLEC18BQ6UXF7 455 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 RD3LP0DJH9 198 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 Q1RN00 199 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 C8orf82Q6P1X6 216 aaPredicted RBP11.96□□□□□ -0.49
SF3A1-201ENST00000215793 OR4D11Q8NGI4 311 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 OR6S1Q8NH40 331 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 CES1P1Q9UKY3 287 aa11.96□□□□□ -0.49
SF3A1-201ENST00000215793 A0A1B0GTQ1 180 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 MMP16P51512 607 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 FOXO1Q12778 655 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 FAM24BQ8N5W8 94 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OR52L2PQ8NGH6 319 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 PARD6AQ9NPB6 346 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 FER1L6Q2WGJ9 1857 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 FAM186AA6NE01 2351 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 RREB1Q92766 1687 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OPN1MWP04001 364 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OR4A8P0C604 315 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OPN1MW2P0DN77 364 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OPN1MW3P0DN78 364 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 SOX8P57073 446 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 COX19Q49B96 90 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 R4GN57 208 aa11.96□□□□□ -0.5
SF3A1-201ENST00000215793 TCRBV16S1A1N1A0A5B0 115 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 MEX3AA1L020 520 aaKnown RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 HTR1DP28221 377 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 RNASEKQ6P5S7 137 aaKnown RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 RNF133Q8WVZ7 376 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 J3QT63 122 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 SOCS1O15524 211 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 TCTEX1D1Q8N7M0 179 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 OR10AC1Q8NH08 325 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 R3HDM4Q96D70 268 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 PCDHGA9Q9Y5G4 932 aaKnown RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 KIAA1324LA8MWY0 1029 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 BRS3P32247 399 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 OR2I1PQ8NGU4 316 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 TECRQ9NZ01 308 aaKnown RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 UBE2L3P68036 154 aaKnown RBP11.95□□□□□ -0.5
SF3A1-201ENST00000215793 TUSC5Q8IXB3 177 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 ATP5SQ99766 215 aa11.95□□□□□ -0.5
SF3A1-201ENST00000215793 A0A1W2PPV9 198 aa11.94□□□□□ -0.5
SF3A1-201ENST00000215793 C5orf67F2Z3F1 127 aa11.94□□□□□ -0.5
SF3A1-201ENST00000215793 CDS2O95674 445 aa11.94□□□□□ -0.5
SF3A1-201ENST00000215793 PPYP01298 95 aa11.94□□□□□ -0.5
SF3A1-201ENST00000215793 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-201ENST00000215793 SELENOPP49908 381 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms