RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 FRG2CA6NGY1 282 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 FFAR1O14842 300 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 CHST1O43916 411 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 DEDDO75618 318 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 PRSS1P07477 247 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 GPR3P46089 330 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 OR3A4PP47883 348 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 AGFG1P52594 562 aaKnown RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 KISS1Q15726 138 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 TSEN54Q7Z6J9 526 aaKnown RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 NDFIP1Q9BT67 221 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 SSC5DA1L4H1 1573 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 A0A0B4J2E0 115 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 A0A1B0GX12 115 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 LILRA5A6NI73 299 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 METTL12A8MUP2 240 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 FCARP24071 287 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 ERHP84090 104 aaKnown RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 FUT7Q11130 342 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 MAJINQ3KP22 176 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 SAPCD1Q5SSQ6 148 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 SLC25A30Q5SVS4 291 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 ZNF784Q8NCA9 323 aaPredicted RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 CLDN23Q96B33 292 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 PRKNO60260 465 aaPredicted RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 HAND1O96004 215 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 ADH4P08319 380 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 BCL3P20749 454 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 HOXA6P31267 233 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 YBX1P67809 324 aaKnown RBP9.27□□□□□ -0.93
VCL-201ENST00000211998 NT5CQ8TCD5 201 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 WFIKKN1Q96NZ8 548 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 OR2A5Q96R48 311 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 OR5AC2Q9NZP5 309 aa9.27□□□□□ -0.93
VCL-201ENST00000211998 A0A087WUJ7 227 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 H0YL77 283 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 ISLRO14498 428 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 RPS4XP62701 263 aaKnown RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 CACNA1SQ13698 1873 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 SLC35E3Q7Z769 313 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 SGMS2Q8NHU3 365 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 WDR13Q9H1Z4 485 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 ZNF107Q9UII5 783 aaPredicted RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 A0A0B4J293 547 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 IGHV3-64DA0A0J9YX35 117 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 MOSPD3O75425 235 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 F2RP25116 425 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 SRP14P37108 136 aaKnown RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 PPP2CBP62714 309 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 RHOBP62745 196 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 PPP2CAP67775 309 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 HES1Q14469 280 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 C10orf111Q8N326 155 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 DEFB123Q8N688 67 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 AMER3Q8N944 861 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 OR52L2PQ8NGH6 319 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 ADAMTS17Q8TE56 1095 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 PP6455Q8WZ26 134 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 BCL2L2Q92843 193 aaPredicted RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 KCNE1BA0A087WTH5 132 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 NDUFS8O00217 210 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 CRYAAP02489 173 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 ZXDAP98168 799 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 PLPPR5Q32ZL2 321 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 ZG16BQ96DA0 208 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 S1PR3Q99500 378 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 A0A1B0GUL6 1792 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 IGHV3-9P01782 118 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 LPAR6P43657 344 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 PGFP49763 221 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 WDR25Q64LD2 544 aaPredicted RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 OR1L3Q8NH93 324 aa9.26□□□□□ -0.93
VCL-201ENST00000211998 KTI12Q96EK9 354 aaPredicted RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 MRM2Q9UI43 246 aaKnown RBP9.26□□□□□ -0.93
VCL-201ENST00000211998 A0A1W2PNR3 127 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 BCL2P10415 239 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 D2HGDHQ8N465 521 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 C16orf52Q8NHV5 167 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 WBP2Q969T9 261 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 COMMD5Q9GZQ3 224 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 A0A0A6YYD5 115 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 PDE6DO43924 150 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 C1QL1O75973 258 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 RPL7P18124 248 aaKnown RBP9.25□□□□□ -0.93
VCL-201ENST00000211998 CDAP32320 146 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 TCTAP57738 103 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 HERPUD1Q15011 391 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 SSX8Q7RTT4 187 aa9.25□□□□□ -0.93
VCL-201ENST00000211998 OR5A2Q8NGI9 324 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms