RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZNF48Q96MX3 618 aaPredicted RBP14.29□□□□□ -0.12
MRPL28-201ENST00000199706 OR14A2Q96R54 314 aa14.29□□□□□ -0.12
MRPL28-201ENST00000199706 C19orf24Q9BVV8 132 aa14.29□□□□□ -0.12
MRPL28-201ENST00000199706 ELL3Q9HB65 397 aaPredicted RBP14.29□□□□□ -0.12
MRPL28-201ENST00000199706 EXOSC4Q9NPD3 245 aaKnown RBP14.29□□□□□ -0.12
MRPL28-201ENST00000199706 IL36RNQ9UBH0 155 aa14.29□□□□□ -0.12
MRPL28-201ENST00000199706 RRP15Q9Y3B9 282 aaKnown RBP14.29□□□□□ -0.12
MRPL28-201ENST00000199706 DENRO43583 198 aaKnown RBP14.28□□□□□ -0.12
MRPL28-201ENST00000199706 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
MRPL28-201ENST00000199706 SC5DO75845 299 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 UBE2E1P51965 193 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 GABARAPL2P60520 117 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 PAX5Q02548 391 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 TPBGQ13641 420 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 TMEM200BQ69YZ2 307 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 PHC2Q8IXK0 858 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 FAM185AQ8N0U4 392 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 TMEM86BQ8N661 226 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 PHYHIPQ92561 330 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 SGCDQ92629 289 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 LHX4Q969G2 390 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 CNBD2Q96M20 576 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 OR5M11Q96RB7 305 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 GPER1Q99527 375 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 IFT22Q9H7X7 185 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 ESM1Q9NQ30 184 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 PCDHB16Q9NRJ7 776 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 ANK2Q01484 3957 aa14.28□□□□□ -0.12
MRPL28-201ENST00000199706 FUOMA2VDF0 154 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 MEGF11A6BM72 1044 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 PSPNO60542 156 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 OR2H2O95918 312 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 PSMA1P25786 263 aaKnown RBP14.27□□□□□ -0.13
MRPL28-201ENST00000199706 TGFBR2P37173 567 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 OR3A1P47881 315 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 UBA52P62987 128 aaKnown RBP14.27□□□□□ -0.13
MRPL28-201ENST00000199706 MLLT11Q13015 90 aaPredicted RBP14.27□□□□□ -0.13
MRPL28-201ENST00000199706 MED22Q15528 200 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 TRAM1Q15629 374 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 UNQ9370/PRO34162Q6UXP9 181 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 LINC00596Q86U02 117 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 C11orf42Q8N5U0 333 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 LINC00312Q9Y6C7 94 aa14.27□□□□□ -0.13
MRPL28-201ENST00000199706 TRAV8-7A0A075B6U6 113 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 IGHV3OR16-10A0A075B7F0 116 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 hADV38S2A0JD32 116 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 RNASEK-C17orf49H0YIS7 233 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 RNASE1P07998 156 aaKnown RBP14.26□□□□□ -0.13
MRPL28-201ENST00000199706 GABRR1P24046 479 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 EEF1B2P24534 225 aaKnown RBP14.26□□□□□ -0.13
MRPL28-201ENST00000199706 DLX6P56179 175 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 GPR176Q14439 515 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 RSU1Q15404 277 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 GRK1Q15835 563 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 MIDNQ504T8 468 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 Q6P435 159 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 SATL1Q86VE3 508 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 LYPD6Q86Y78 171 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 LDLRAD3Q86YD5 345 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 UFD1Q92890 307 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 C1orf147Q96MC9 270 aaPredicted RBP14.26□□□□□ -0.13
MRPL28-201ENST00000199706 UQCC2Q9BRT2 126 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 YTHDF1Q9BYJ9 559 aaKnown RBP14.26□□□□□ -0.13
MRPL28-201ENST00000199706 NCOR1P1Q9H4R4 102 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 SIRT7Q9NRC8 400 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 GSTK1Q9Y2Q3 226 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 POMT1Q9Y6A1 747 aa14.26□□□□□ -0.13
MRPL28-201ENST00000199706 PNMA8CA0A1B0GUJ8 204 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 PIN1P1O15428 100 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 INMTO95050 263 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 ZNF728P0DKX0 622 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 OR3A4PP47883 348 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 KCNJ3P48549 501 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 P2RX3P56373 397 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 ERVFRD-1P60508 538 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 BAMBIQ13145 260 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 ZNF273Q14593 569 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 DEFB112Q30KQ8 113 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 RUSC1-AS1Q66K80 236 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 Q6YL49 198 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 SLC25A28Q96A46 364 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 MRPS24Q96EL2 167 aaKnown RBP14.25□□□□□ -0.13
MRPL28-201ENST00000199706 FAM192AQ9GZU8 254 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 METTL9Q9H1A3 318 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 HEXA-AS1Q9H8Q6 139 aa14.25□□□□□ -0.13
MRPL28-201ENST00000199706 UBE2J1Q9Y385 318 aaPredicted RBP14.25□□□□□ -0.13
MRPL28-201ENST00000199706 SF3B6Q9Y3B4 125 aaKnown RBP14.25□□□□□ -0.13
MRPL28-201ENST00000199706 A0A0G2JK05 382 aa14.24□□□□□ -0.13
MRPL28-201ENST00000199706 SLC33A1O00400 549 aaPredicted RBP14.24□□□□□ -0.13
MRPL28-201ENST00000199706 NPFFO15130 113 aa14.24□□□□□ -0.13
MRPL28-201ENST00000199706 CPEP16870 476 aa14.24□□□□□ -0.13
MRPL28-201ENST00000199706 DUSP1P28562 367 aa14.24□□□□□ -0.13
MRPL28-201ENST00000199706 COMPP49747 757 aaPredicted RBP14.24□□□□□ -0.13
MRPL28-201ENST00000199706 EDDM3BP56851 147 aa14.24□□□□□ -0.13
MRPL28-201ENST00000199706 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
MRPL28-201ENST00000199706 ACSM3Q53FZ2 586 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms