RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SUCNR1Q9BXA5 334 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 WDR13Q9H1Z4 485 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 ZC4H2Q9NQZ6 224 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 SLC2A9Q9NRM0 540 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RASL12Q9NYN1 266 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 ZNF629Q9UEG4 869 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 FBXO9Q9UK97 447 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 NUP50Q9UKX7 468 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 TTC28Q96AY4 2481 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 KIR2DS1A0A191URI9 304 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 ZNF891A8MT65 544 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 MPTX1A8MV57 137 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 AQP7O14520 342 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 ZP3P21754 424 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 KIR2DS4P43632 304 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 UCP3P55916 312 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RBM39Q14498 530 aaKnown RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 KIR2DS1Q14954 304 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 OR2T2Q6IF00 324 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 IGFL2Q6UWQ7 119 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 UNQ6126/PRO20091Q6UXV3 157 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 FAM214BQ7L5A3 538 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RELL2Q8NC24 303 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 STOML3Q8TAV4 291 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 GALNT14Q96FL9 552 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RTL8AQ9BWD3 113 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 FGF23Q9GZV9 251 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 CRIM1Q9NZV1 1036 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 RCC2Q9P258 522 aaKnown RBP7.09□□□□□ -1.27
VAMP3-201ENST00000054666 DNAJB11Q9UBS4 358 aa7.09□□□□□ -1.27
VAMP3-201ENST00000054666 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 HSPB6O14558 160 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 PPYP01298 95 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 TK1P04183 234 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 OR5AC1P0C628 307 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 LYL1P12980 280 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 IDH3GP51553 393 aaPredicted RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 EIF5AP63241 154 aaKnown RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 NAAAQ02083 359 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 IL24Q13007 206 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 IL13RA2Q14627 380 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SRSF7Q16629 238 aaKnown RBP eCLIP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 DEFB109BQ30KR1 87 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 PHLDA2Q53GA4 152 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 PAN3Q58A45 887 aaKnown RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SPATA46Q5T0L3 261 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 Q6ZS49 121 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 HSD17B13Q7Z5P4 300 aaPredicted RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 FAM185AQ8N0U4 392 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 CNEP1R1Q8N9A8 125 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 AQP10Q96PS8 301 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 RNF126Q9BV68 326 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 PKIBQ9C010 78 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 LIME1Q9H400 295 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 RIMS4Q9H426 269 aaPredicted RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 MTCH1Q9NZJ7 389 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 OR5AC2Q9NZP5 309 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF318Q5VUA4 2279 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 MED12LQ86YW9 2145 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 KRBOX1C9JBD0 128 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 H0YIZ8 118 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 J3QT63 122 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SYNGR1O43759 233 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SMPD2O60906 423 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 LYZL6O75951 148 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF205O95201 554 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 CNOT4O95628 575 aaKnown RBP7.08□□□□□ -1.28
VAMP3-201ENST00000054666 AADACP22760 399 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 IGHV1-2P23083 117 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 CA6P23280 308 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 IL32P24001 234 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 PPP1CBP62140 327 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SRPXP78539 464 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 GGNBP1Q5YKI7 109 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF585AQ6P3V2 769 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 Q6ZT83 130 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 FOXRED2Q8IWF2 684 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 LGI3Q8N145 548 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF565Q8N9K5 539 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 REG4Q9BYZ8 158 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 SHARPINQ9H0F6 387 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 RHOFQ9HBH0 211 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 Q9N2K0 584 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 ZFP57Q9NU63 452 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 POLDIP2Q9Y2S7 368 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 DOCK7Q96N67 2140 aa7.08□□□□□ -1.28
VAMP3-201ENST00000054666 F8VVB4 439 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 F8VWA3 439 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SLC34A2O95436 690 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SCGB1D2O95969 90 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 NAPSAO96009 420 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 CTXN2P0C2S0 81 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF250P15622 560 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 SELEP16581 610 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 ZNF14P17017 642 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 TMEM187Q14656 261 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 OR2A2Q6IF42 318 aa7.07□□□□□ -1.28
VAMP3-201ENST00000054666 INO80CQ6PI98 192 aaPredicted RBP7.07□□□□□ -1.28
VAMP3-201ENST00000054666 FBXW12Q6X9E4 464 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms