RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 AK3Q9UIJ7 227 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 ZDHHC8Q9ULC8 765 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 RAXQ9Y2V3 346 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 PUS1Q9Y606 427 aaKnown RBP eCLIP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 A0A0A6YYJ9 748 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 CLN5O75503 358 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 FLI1Q01543 452 aaPredicted RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 ZBTB37Q5TC79 503 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 XAF1Q6GPH4 301 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SHISA5Q8N114 240 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SVBPQ8N300 66 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 ZNF485Q8NCK3 441 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 APCDD1LQ8NCL9 501 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 YIPF5Q969M3 257 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 TPPP3Q9BW30 176 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SLC25A10Q9UBX3 287 aaPredicted RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 A0A0U1RQV5 110 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 LANCL1O43813 399 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 CCDC144NLQ6NUI1 221 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SLC25A47Q6Q0C1 308 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 PXT1Q8NFP0 134 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 STARD10Q9Y365 291 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 IGKV3D-11A0A0A0MRZ8 115 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 GEMIN2O14893 280 aaKnown RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 RBP4P02753 201 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 ZFP36L1Q07352 338 aaKnown RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 MRPL14Q6P1L8 145 aaKnown RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 CCDC190Q86UF4 302 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 ADAMTS17Q8TE56 1095 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 RCL1Q9Y2P8 373 aaKnown RBP9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 TIMM9Q9Y5J7 89 aa9.05□□□□□ -0.96
NIPAL3-201ENST00000003912 C3orf85A0A1B0GTC6 90 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 HOXD11P31277 338 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 FAM209AQ5JX71 171 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 LRRTM1Q86UE6 522 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 OR10AC1Q8NH08 325 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 MISP3Q96FF7 219 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 GRAMD2BQ96HH9 432 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 WDR13Q9H1Z4 485 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 ZNF703Q9H7S9 590 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 WIPI2Q9Y4P8 454 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 MYOFQ9NZM1 2061 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 CRYZL1O95825 349 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 LGALS7P47929 136 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 TMEM267Q0VDI3 215 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 TGIF2LYQ8IUE0 185 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 TGIF2LXQ8IUE1 241 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SIGLEC12Q96PQ1 595 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 GPA33Q99795 319 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 DSPPQ9NZW4 1301 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 THSD7BQ9C0I4 1608 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 RECKO95980 971 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SLC25A6P12236 298 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 OPRK1P41145 380 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 BARX1Q9HBU1 254 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 LPAR2Q9HBW0 351 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 PMELP40967 661 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 LIMS1P48059 325 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 OR2B8PP59922 312 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 ZXDCQ2QGD7 858 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 TIGITQ495A1 244 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 ACSM6Q6P461 480 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 MS4A7Q9GZW8 240 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 MED9Q9NWA0 146 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 INSIG2Q9Y5U4 225 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 IGHV3OR15-7A0A075B7D8 119 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 RFPL4AA6NLU0 287 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 ZNF785A8K8V0 405 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 C9orf172C9J069 976 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 RFPL4AL1F8VTS6 287 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 FGF7P21781 194 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 CD80P33681 288 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 ASCL1P50553 236 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 TNFSF10P50591 281 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SCARB1Q8WTV0 552 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SRXN1Q9BYN0 137 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 CHCHD2Q9Y6H1 151 aaPredicted RBP9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
NIPAL3-201ENST00000003912 HSBP1L1C9JCN9 74 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 DVL1O14640 695 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 TRAF3IP2O43734 574 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 CSRP3P50461 194 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 DVL1P1P54792 670 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 ERVFRD-1P60508 538 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 RPL31P62899 125 aaKnown RBP9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 BAK1Q16611 211 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 SP6Q3SY56 376 aa9.03□□□□□ -0.96
NIPAL3-201ENST00000003912 WDFY2Q96P53 400 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms