RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	CCNB1IP1	Q9NPC3	277 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	SAR1A	Q9NR31	198 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF275	Q9NSD4	429 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	FGFR1OP2	Q9NVK5	253 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	PTTG3P	Q9NZH4	202 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	EIF3K	Q9UBQ5	218 aa	Known RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RIMS3	Q9UJD0	308 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	PLSCR5	A0PG75	271 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523		E5RGE8	158 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	SNX3	O60493	162 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	NDUFS6	O75380	124 aa	Known RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	THY1	P04216	161 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF12	P17014	697 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	KDELR2	P33947	212 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	SRP14	P37108	136 aa	Known RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF133	P52736	654 aa	Predicted RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	CRYBA2	P53672	197 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	UGT2B15	P54855	530 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	SELENOW	P63302	87 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	CD47	Q08722	323 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF415	Q09FC8	603 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	TRAM2	Q15035	370 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	FAM120AOS	Q5T036	256 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	THEM4	Q5T1C6	240 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	MICU2	Q8IYU8	434 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	RNF113B	Q8IZP6	322 aa	Known RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	FAM58A	Q8N1B3	248 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	GBGT1	Q8N5D6	347 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	RFLNB	Q8N5W9	214 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	OR4D11	Q8NGI4	311 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	SYNPR	Q8TBG9	265 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	TMEM255B	Q8WV15	326 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	LHX4	Q969G2	390 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	BPIFA2	Q96DR5	249 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	TIMD4	Q96H15	378 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF75A	Q96N20	296 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	SH3GL3	Q99963	347 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	HOPX	Q9BPY8	73 aa	Predicted RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	VCX3B	Q9H321	246 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	TXNIP	Q9H3M7	391 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	TPK1	Q9H3S4	243 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	RIMS4	Q9H426	269 aa	Predicted RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ANKRD19P	Q9H560	264 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	MED4	Q9NPJ6	270 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	MEPE	Q9NQ76	525 aa	Predicted RBP	5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF224	Q9NZL3	707 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	ENPP5	Q9UJA9	477 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	NSG2	Q9Y328	171 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	OR2W1	Q9Y3N9	320 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	WNK2	Q9Y3S1	2297 aa		5.21	□□□□□ -1.57
CASC19-238	ENST00000641523	IGLV3-9	A0A075B6K5	115 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	XKRY	O14609	159 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	CHEK1	O14757	476 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	SYT7	O43581	403 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	TRMU	O75648	421 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	NDUFA7	O95182	113 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	IGHM	P01871	453 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	TSPAN19	P0C672	248 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	IFI30	P13284	250 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	CCL2	P13500	99 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	ZNF250	P15622	560 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	DUT	P33316	252 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	AQP2	P41181	271 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	GDI2	P50395	445 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	DVL1P1	P54792	670 aa	Predicted RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	RPL27	P61353	136 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	MICB	Q29980	383 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	ZNF718	Q3SXZ3	478 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	ARMCX4	Q5H9R4	360 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	C6orf226	Q5I0X4	101 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	UQCC3	Q6UW78	93 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	HACD2	Q6Y1H2	254 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	SYT14	Q8NB59	555 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	OR4C5	Q8NGB2	326 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	PFN4	Q8NHR9	129 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	ACOT11	Q8WXI4	607 aa	Predicted RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	RBM4B	Q9BQ04	359 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	RBM4	Q9BWF3	364 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	EFCAB1	Q9HAE3	211 aa		5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	FAM32A	Q9Y421	112 aa	Known RBP	5.21	□□□□□ -1.58
CASC19-238	ENST00000641523	MGAM2	Q2M2H8	2515 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	LRP5L	A4QPB2	252 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	EFCAB9	A8MZ26	197 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	CCL24	O00175	119 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	PPIH	O43447	177 aa	Known RBP	5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	TCF21	O43680	179 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	ZNF682	O95780	498 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	IGHV3-13	P01766	116 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	PRSS2	P07478	247 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	ACAA1	P09110	424 aa	Predicted RBP	5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	CST2	P09228	141 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	MMP7	P09237	267 aa	Predicted RBP	5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	PATE4	P0C8F1	98 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	GSTM3	P21266	225 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	STOM	P27105	288 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	RPL4	P36578	427 aa	Known RBP	5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	OR1E2	P47887	323 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	SCRN3	Q0VDG4	424 aa		5.2	□□□□□ -1.58
CASC19-238	ENST00000641523	PABPC1L2A	Q5JQF8	200 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms