RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 FAM209AQ5JX71 171 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 TMEM211Q6ICI0 200 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 TMPRSS7Q7RTY8 843 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 GLRX5Q86SX6 157 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 ZDHHC23Q8IYP9 409 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 SUMF1Q8NBK3 374 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 BVESQ8NE79 360 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 TOMM40LQ969M1 308 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 SLAMF9Q96A28 289 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 PIK3IP1Q96FE7 263 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 ZNF442Q9H7R0 627 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 C12orf4Q9NQ89 552 aa14.68□□□□□ -0.06
PHGDH-211ENST00000641213 F8VVB4 439 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 F8VWA3 439 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 IL18BPO95998 194 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 ZNF728P0DKX0 622 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 HAAOP46952 286 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 SNTB1Q13884 538 aaKnown RBP14.67□□□□□ -0.06
PHGDH-211ENST00000641213 ELP2Q6IA86 826 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM219AQ8IW50 185 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 SAXO1Q8IYX7 474 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 EIF4E3Q8N5X7 224 aaKnown RBP14.67□□□□□ -0.06
PHGDH-211ENST00000641213 TMEM178AQ8NBL3 297 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 OR1K1Q8NGR3 316 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 ZNF552Q9H707 407 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-211ENST00000641213 ZDHHC11Q9H8X9 412 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 GSKIPQ9P0R6 139 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A10PA6NDY2 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A18PA6NE21 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A16PA6NEW6 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A20PA6NIJ5 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A8PA6NJQ4 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 SLC22A20A6NK97 555 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A7PA6NKC0 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A22PA8MWA6 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A12PA8MX19 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A5PA8MXJ8 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A23PA8MXZ1 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 LGALS8O00214 317 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A15PP0C7V4 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A13PP0C7W8 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A14PP0C7W9 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 FAM90A24PP0C7X0 464 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 PIGPP57054 158 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 PAN3Q58A45 887 aaKnown RBP14.67□□□□□ -0.06
PHGDH-211ENST00000641213 STOML3Q8TAV4 291 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 SUN5Q8TC36 379 aa14.67□□□□□ -0.06
PHGDH-211ENST00000641213 BARX1Q9HBU1 254 aaPredicted RBP14.67□□□□□ -0.06
PHGDH-211ENST00000641213 MSGN1A6NI15 193 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 ZSCAN5BA6NJL1 495 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 ZNF732B4DXR9 585 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 GALR2O43603 387 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-211ENST00000641213 CD82P27701 267 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 FCGR2CP31995 323 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 NUP62P37198 522 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-211ENST00000641213 FBXW9Q5XUX1 488 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 BCL2L2Q92843 193 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-211ENST00000641213 CYTL1Q9NRR1 136 aa14.66□□□□□ -0.06
PHGDH-211ENST00000641213 A0A1B0GW55 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 CDRT15L2A8MXV6 281 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L2P0CJ85 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L3P0CJ86 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L4P0CJ87 422 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L5P0CJ88 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L6P0CJ89 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4L7P0CJ90 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 APLNRP35414 380 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 WNT5AP41221 380 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 FXYD4P59646 89 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 TUSC1Q2TAM9 212 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 VASH2Q86V25 355 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 TMEM200AQ86VY9 491 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 HS3ST6Q96QI5 342 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 OPA3Q9H6K4 179 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 MTCH1Q9NZJ7 389 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DUX4Q9UBX2 424 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 MEMO1Q9Y316 297 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 CD300LBA8K4G0 201 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 KRBOX1C9JBD0 128 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 PET100P0DJ07 73 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 M6PRP20645 277 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 TNFSF10P50591 281 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 S100A10P60903 97 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 FGF12P61328 243 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 PMP22Q01453 160 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 CLN3Q13286 438 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 IAH1Q2TAA2 248 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-211ENST00000641213 ABCA11PQ4W5N1 156 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 DEFB124Q8NES8 71 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 OR5A2Q8NGI9 324 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 EXTL1Q92935 676 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 AQP10Q96PS8 301 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 PARD6AQ9NPB6 346 aa14.65□□□□□ -0.06
PHGDH-211ENST00000641213 CACNA1HO95180 2353 aa14.64□□□□□ -0.07
PHGDH-211ENST00000641213 DPPA2Q7Z7J5 298 aa14.64□□□□□ -0.07
PHGDH-211ENST00000641213 RTN4IP1Q8WWV3 396 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-211ENST00000641213 MRPL24Q96A35 216 aaKnown RBP14.64□□□□□ -0.07
PHGDH-211ENST00000641213 MOB3AQ96BX8 217 aa14.64□□□□□ -0.07
PHGDH-211ENST00000641213 SHARPINQ9H0F6 387 aa14.64□□□□□ -0.07
PHGDH-211ENST00000641213 NAA60Q9H7X0 242 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms