RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 UBE3DQ7Z6J8 389 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 BATF2Q8N1L9 274 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 GPR119Q8TDV5 335 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 TAAR6Q96RI8 345 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 SSBP3Q9BWW4 388 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 DLEC1Q9Y238 1755 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 TRAV20A0A0B4J274 112 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 F5H5P2 479 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 TAPBPO15533 448 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 GSTZ1O43708 216 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 NKX2-2O95096 273 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 PRB1P04280 392 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 GAPDHP04406 335 aaKnown RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 COX6A1P12074 109 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 SYT9Q86SS6 491 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 COMMD7Q86VX2 200 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 R3HDM4Q96D70 268 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 STARD4Q96DR4 205 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 VAMP8Q9BV40 100 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 DLL3Q9NYJ7 618 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 RALYQ9UKM9 306 aaKnown RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 LRRC37AA6NMS7 1700 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF205O95201 554 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 PMS2P2O95744 297 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 RBP4P02753 201 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 OR5G3P0C626 314 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 HTN1P15515 57 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF26P17031 533 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZBTB25P24278 435 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 CCR9P51686 369 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 MMDQ15546 238 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 EBLN2Q6P2I7 272 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF620Q6ZNG0 422 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 DTWD1Q8N5C7 304 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 OR1S2Q8NGQ3 325 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 RBBP6Q7Z6E9 1792 aaKnown RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 KIAA1551Q9HCM1 1747 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 SNAP29O95721 258 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ACP2P11117 423 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 AZGP1P25311 298 aaKnown RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 NPY1RP25929 384 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 KRTDAPP60985 99 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 SORDQ00796 357 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 FAM27E3Q08E93 113 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ADIRFQ15847 76 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 DHRS4L2Q6PKH6 230 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 MDP1Q86V88 176 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 BARD1Q99728 777 aaKnown RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 NPAS1Q99742 590 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 NTNG1Q9Y2I2 539 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 HILPDAQ9Y5L2 63 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 OR5AC1P0C628 307 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 PPIAL4GP0DN37 164 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 HINT1P49773 126 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF121P58317 390 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-218ENST00000640036 UBE2KP61086 200 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 LCN2P80188 198 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 DGAT2L6Q6ZPD8 337 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ANGPTL5Q86XS5 388 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 ZNF547Q8IVP9 402 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 LINC01555Q8NAE3 123 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 OR6X1Q8NH79 312 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 SPSB1Q96BD6 273 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 MSL2Q9HCI7 577 aa4.43□□□□□ -1.7
SCN1A-218ENST00000640036 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 IGLV3-16A0A075B6K0 115 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 IGHV3OR16-10A0A075B7F0 116 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 CBR1P16152 277 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TOMM34Q15785 309 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SOHLH1Q5JUK2 328 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ZDHHC24Q6UX98 284 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 OR9Q2Q8NGE9 314 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 PHYHIPQ92561 330 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ARV1Q9H2C2 271 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM38AQ9H6F2 299 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SLC25A19Q9HC21 320 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 LOC102723996A0A087X1L8 192 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 A6NIN4 97 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 TMEM210A6NLX4 147 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 BTF3P20290 206 aaKnown RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ACHEP22303 614 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 SLC6A12P48065 614 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GPX8Q8TED1 209 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 MCHR2Q969V1 340 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ANGPTL4Q9BY76 406 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 PKIBQ9C010 78 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 NKX6-2Q9C056 277 aaPredicted RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 POFUT1Q9H488 388 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GMPR2Q9P2T1 348 aaKnown RBP4.42□□□□□ -1.7
SCN1A-218ENST00000640036 FLVCR2Q9UPI3 526 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 A0A0A6YYD5 115 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 M0R1X1 148 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 ONECUT2O95948 504 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GZMHP20718 246 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 AADACP22760 399 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 FCER1GP30273 86 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 GLRXP35754 106 aa4.42□□□□□ -1.7
SCN1A-218ENST00000640036 MMP15P51511 669 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms